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54-2153-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26464320 [Map]; Strand: c
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 189; Region: intergenic
      • AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -1852; Region: intergenic
    Flanking Genome Sequence: 54-2153-1 - 3-prime edge 
    GTCAATTGAT ACATACAAGA TGAATCTATT GATAAAGAAT TTGATATCCA 
    TGAGCTGTAT TTTCGACATA GACCTGGTCT CAATTAACAA ATATATATCT 
    CTTTATTAAA CCATCCAAAT TTGTCTATAT CTAGGGTGAT CATATCCATT 
    ATACTATTAT GCATCTCTTT CAATTTTGGT ATTGGCCGGT GAGTCGGCTC 
    AAATGTTTTA ACAAGGCAAT GAAATGTATA AATAAGGTTT AATTGTGTAT 
    ATACAGATGC TCGCTAAAAG TTATGTGAGA TTATATTGGT GAATT

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66240.3

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link
InterPro Scan - TAIR