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54-1544-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58741 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1544-1 - 5-prime edge 
    GCNANAACAA CTTCCTANTA ACCACGAACA GAGCNTTCTC GGACTCATCA 
    TGGGAGATTC CACAGATCCC TCTCTTGAAC TCAACAGCAT TCTCCAAACA 
    TCTCCCACCT TCCACGACTC TGACTACTCA TCACCCGGTT TCGGAGTCGT 
    CGACACCGGC TTCGGTTTAG ACCACCACTC TGTTCCGCCG TCACATGTTT 
    CCGGTCTTCT GATCAACCAA AGTCAAACCC ACTACACACA GAATCCTGCG 
    GCTATCTTCT ACGG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR