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54-0766-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: 54-0766-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAT CACTTAGNTT NCGACTTTTC GGAAATATAT TAGCCGATGA 
    ATTAGNCGTT GTTGTTCTTG TTTCTTTAGT ACCTTTAGTG GTTCCTATAC 
    CTGTTATGTT CCTTGGATTA TTNACAAGCG GGATTCAAGC TCTCATTTTT 
    GCCACTTNGG ATAAAAATTC TTTCTGACAT CATCCGATTN TTATTTCGAG 
    GACTCACCGA AATCCCTCGG ATAGTGCCAC AATCTGTTCT ACGTACAACA 
    ATATGTTGAA CTACTTCAAC AAGTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 298918 [Map]; Strand: c
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: -817; Region: promoter
    Flanking Genome Sequence: 54-0766-1 - 3-prime edge 
    AGAATAATGC TACAAGTTGA GGTATTTAGT AAACAAGGTG AGCTATGGTC 
    ATTTATTACT TATTAGTCAA TAGTATTTTT TTTTGTTTCA TTANCTCTTA 
    CTGCAAAATT TACNTGGNAG TGCACAATTA ATAATAGTAA CATGGGTTTC 
    AACATTAAAC NCCCGAGGAT ACAACTTTGT AAATATATGN GGGTAGGTCA 
    ACAAAATNAA NAANTAGNGG GAAAATNANT TNAAGGCATA AAGGCCAATA 
    ATTCANCCGT AATTAATANT NGGACNNGGT CTNNNGTCAA AGCGGTTCAA 
    AGGGGTTNCT CTGCCNGTTN NGTGGNCTCT CNNTTNGNAN CGGGNTAAAN 
    GNNGTNNNNG GNNTGGNGNG ACATNGAGAC CNGTNGAGGG TNANAATTAN 
    NNACGTNNCN ANTTAGNANA NNGNNTAGGG ANTGNNGTNN CNNNNGNGGA 
    CNANANGNGN NAGANCCATA NCTNGAGGCN NCNACCNTNT NNAGCTNACT 
    GNAGNACAAA ACCTNNGNGA CAGTNAAANT NNANACNGNC GTNGGCNTNN 
    NGGNGNCNNN NGGGCNGNAG CGCNNGTNAG ANGNGGGNNG ANCGTNGTGN 
    AGNGGANAAG ANNNTNATCG NGAGANGGCN NCNNNNNNTN TTGNGGANCN 
    NNNNANNGGT NACNACNNNC TNGANGNNCA CCNNNNACCG NGGAANTGNG 
    NTNNNTNCTA AGANNCTCNN GNNNTNATNG CNNAGNNTAN ACGNGGNCAN 
    NCANACNGCN CNANCNCGCG TNCATNNCNN CNNCCCNGNC NCGNNTN

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR