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54-0703-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2845899 [Map]; Strand: w
      • AT3G09260.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -2118; Region: intergenic
      • AT3G09270.1 - [+] show detail - glutathione S-transferase TAU 8
        Distance: 2390; Region: intergenic
    Flanking Genome Sequence: 54-0703-1 - 5-prime edge 
    GTGGACGGTG GGCTCTTCCA TTTCCTTATT TTCTTAAAAC ATTTTTATTA 
    TATTAAAATA TACCATGCGA TCCACAGTTA GTAATTTTAT TATATAAAAA 
    ATTAGGTCGC AGCTATTTGA AAGCGAAAAT GATAGCATGA CCATCTGAGG 
    GATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2845783 [Map]; Strand: w
      • AT3G09260.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -2002; Region: intergenic
      • AT3G09270.1 - [+] show detail - glutathione S-transferase TAU 8
        Distance: 2506; Region: intergenic
    Flanking Genome Sequence: 54-0703-1 - 3-prime edge 
    CCGTCCACCA ATAAATTACC GAGTAAACGA TTTATACGAC CGTCGAAATG 
    AACTGAGAAG ATAACGAGAA AAAAGAATCG GAATTATATA TTTTGACTCA 
    AAAACGAGAA AATAATTCGT AGCGATTCTA ACTCCTACTT TATACCTTAA 
    GGAACACNGA AACTTATGAG ATTTTATGGA AGTTACAACG TGGTTAGTTT 
    TTTTTTCTTT CTATTGGACC AGNGTTAAAT TTTCAATTTG GCATGGNGTA 
    AAACTACACA AACAGCCTTT CTTTCTCTGA CCCGTAAACT ACTATTTATC 
    TATTTCAAAT CTAACAGATT TCATTATGGC GATAGATATA GTCCTTAAAA 
    ATTATATTGG ATTCATTAGC AAAACATAAC TATACATTGA AATTGTATTG 
    ATAAANATTT ATATTATTAC ATGCAACCAA GCAAGAGCGG ATGTACACGT 
    TTTGGTGTGG GTGCGAGTTC CACATCANAA TTTGTTTGTC TATATAAGTA 
    ATTGTGAGAG ACAATCGGAA TAATTGGCTA GAATCAGTCT TTTTTTCCTA 
    GTGGATCTTT AAAAACCATT CTTTTATACC AAGCATGTAC ATGCTGNGGT 
    GTGGGTGTAA GTAAATCCTG ACCCAATGAA AATTGTTTTT GGACTCGCCA 
    CTGCAACGAA GTGTACCAAC AACTTGACTA GGATTCTAAG TTCTTTTATG 
    TATAGGATGT CTT

AT3G09260.1

Model type
Protein coding
Short Description
Glycosyl hydrolase superfamily protein
Curator Summary
Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.
Computational Description
PYK10; FUNCTIONS IN: beta-glucosidase activity, copper ion binding, hydrolase activity, hydrolyzing O-glycosyl compounds, fucosidase activity; INVOLVED IN: ER body organization, response to salt stress, response to symbiotic fungus, cellular response to cold, response to osmotic stress; LOCATED IN: peroxisome, nucleus, vacuole, membrane, ER body; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66280.1); Has 11331 Blast hits to 11008 proteins in 1473 species: Archae - 140; Bacteria - 7847; Metazoa - 701; Fungi - 200; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09270.1

Model type
Protein coding
Short Description
glutathione S-transferase TAU 8
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink).
Link
InterPro Scan - TAIR