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54-0642-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 51019 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -2669; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 7686; Region: intergenic
    2. Chromosome: 2; Position: 54000 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -5650; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 4705; Region: intergenic
    Flanking Genome Sequence: 54-0642-2 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    GCATTGTTCG TCTATGAAGA GTCGTTCTTA TCAAATAGTG ATTACCTTGC
    NGGNCNNACA GANATACNGT GNTAACATCT TTGTCGAATT CGACGTTAAG
    GTGTAGGTTG GTCTTTCTAG AAAGCTGAGC CTCGGGGCGT TCAAATTGAT
    ATGCAGATCG CCATGAAAAT TCTTTTGGAT TGCTAGAAAT TTGCTTTCTA
    ATTTGGTTGA TCGTGCAGTG AGGATCTGCG TTTCGCTGGT TGCATCTGTT
    GCAAAGAAAG AGTCATAACC TTCAGTGTAA ATTTCTGATT GAGGCGAGAT
    TGGCTTCTTT TGAAAGCTAA TTTTCGGGGC ATTCCGTGGA TAGGTTACAC
    GCCACGCAGT TCGTCGGAAT CTTCCTGGAA ATTGATTTCA AAGTCNA

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR