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54-0458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59306 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -20; Region: promoter
    Flanking Genome Sequence: 54-0458-1 - 5-prime edge 
    GTAATAGAAG ACATAGNTAA GATTAGAAAG CAAAGATTAA CAAAATGTTG 
    TGTAAGAGAA GCATGATGAA TTGTTTAATC AGCCTAAGTT AATGACAAAG 
    GGAAAATGAT AGGAAACCGG AAATAAGAGA GAAAAAGAAA GGAGGAAGCC 
    CACTTTGCCA CTTTAATATC TTGCACGCAT CCAATATACC TCACCACACC 
    ACATCACAAC AACGAAGAAG AAGAAGAAGA AGAAGAGCTT CAAGAAGACA 
    AATACACTAT TTTTTATCGT CTGCAATGCC CTTACCCTTT GAAGAGTTTC 
    AAGGGAAGGG GATTTCTTGT TTCTTTCTTT CTCGTCTTCC TTCCCCCAAC 
    CACCGTCGTC TCCGCTTTTG AGCCACCGCA AAGCAAGAGG CGGCGAAGAA 
    GAAGAGGAAG AAGTTCCCGC GGCGGAGCCT ACCTCTGTTC TGGACTCCCT 
    CATAAGCCCA ACCTCTTCCT CCACGGTGTC TTCCTCTCAC GGCGGAAACA 
    GCGCCGTCGG AGGCGGCGGC GACGCCACCA CCGATGAGCA ATGCGGAGCC 
    ATTGGGTTGG GTGATTGGGA GGAGCAAGTT CCTCATGACC ACGAACAGAG 
    CATTCTCGGA CTCATCATGG GAGATTCCAC AGATCCCTCT CTTGAACTCA 
    ACAGCATTCT CCAAACATCT NCCACCTTCC ACGACTCTGA CTACTCATCA 
    CCCGGTTTCG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59422 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -136; Region: promoter
    Flanking Genome Sequence: 54-0458-1 - 3-prime edge 
    TCTATTACAA CCCCACTCTT ACATCACGCG CGTGGCTTGC AAACTCCTTT 
    CAGTGACATG AACATGATGG TAAACAAAAA TACTAAATGT TATGATATAT 
    TTTTAAATAT TGTATTTGTC TTCTTGAATT ACCTAGAAAC TATTAAAAAA 
    AAAAACATTT TCCCCATNTT TTTNGANGTN GNNCCGGNNT NTTTANANGT 
    CATAATNCTN GCCCAAAAAA AAAANGGGGN GNNNNANNNT TNGGGNANGG 
    NTTNGGTTTT TTNNAANTTN TTTTNNNNNA AAAAACNTTN GGGGNNGGNA 
    ANNAANTTNG GGNANTTGGT TTGNTTTNGT TTNNNNNAAA GGGGNNGGNN 
    NTTTTTNCNT TTGGGGGNAN TTTNGCCCCN AANNNTTNNT TTNGGGGNNG 
    GNAAAANNTC CNNCCCGGGN CNGNAANCCN GNGGNNCCNT TTAAA

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR