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54-0456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59304 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -18; Region: promoter
    Flanking Genome Sequence: 54-0456-1 - 3-prime edge 
    GGGNNNNGAA ANNANGGATN NGGGGNGGNN GNGAAAANAA AAANAAAAAA 
    AAAAAAANNN NGGNGTCCNT TNTGGAACCN AGNACTNTNT NGACCGGTAC 
    CGACCGTNTT CATCCCTATC TATNNCAACC CCNCTCTTAC ATCACAGCGC 
    GTGGCTNGCA AACTCCNTTC AGTGACATGA ACATGATGGT NAACAAAAAT 
    ACTAAATGTG AAGANATATG GANTAAATAN NGTANNTGNC TTCTTGAATT 
    ACTANAAACN ATGAAAAAAA AAAACAAAAG CCCCANAGGN AGNGGNANGG 
    NNNANCCNNA AAATTTTTTN AGCACGNGAT ACAAGCCAAA AANAAAAANG 
    GGGGGGCCNA NNAAGGNGGG GAGNGAAAAA CCCCCCTNAA AAAAAANGNG 
    ACNAAGAGGA NAGGANGGGG AGGGAGGCGA GGGGAGNGGC ANANGNCANN 
    AGANGGANAN ANNNNAANGG GNNCAAAACA CANCANGCAN AGGAAGAAGA 
    AAGACGAGGA AANGGNNGAA AACNNACAAA NNAGNCNNAA GNCAGAAAGA 
    GATAAAANCG GAAAAAAANA CAAAGGCTNN GGCGGNGNNC NCGGCGCNGG 
    CGGGAGGCGG GNNGANCGNA NAAAGAGANA GAGTANANAA AAAAANCGCG 
    ACTGNNNTGA NNGAGAGCAT AACNANAACA ANAGAGNAGA GCGNGAAAAG 
    NGAGNTAANA AAACATAGGA AANANAGAAA AAGAGNGGTA ANNCAGGNGC 
    AAAGANAAAG NACGGNTGAG AAGGAGAGAA AAGNTAGAAA GCAAGAANAG 
    AGCGNGAANC AANAGAGAAG AAAAANNNAC NAAGTGANGN AAGCAGNNNA 
    ANGNNAATAA AGAGGAAAAG ACAGNAGNNG ANANCGAAGG AGAGAAAGAN 
    NNNAAGAAAG AAAAG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR