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54-0391-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23363884 [Map]; Strand: w
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon11 (3UTR)
    Flanking Genome Sequence: 54-0391-2 - 5-prime edge 
    NTGACCCANN CTNCATCTGT TNCTGTGCNN GNATATAAGT GTNTGGGCAA 
    AAACTCANAC GACANGAANC TGCAAAAAAG TGTTTTTTTT TAACTCTGCT 
    CTTTCCAATC TAAACCCATT GGTCCCTTAC AAANAATCCA TTATATTTAC 
    AAAGCATACA ACTATNCNCA ANTTTGACNA ATCCTACAAT CTTATGGANA 
    NATAACTAAT GGGTTTTAAA CCAAAAAAAC TGGTCACTTC TCTATAATCC 
    TAAANATATT ACTTGTTCAG CGCTGAAGCT ATACTTTTTT ACTCTCTTCT 
    GTTTTCACNC GAATCTTCNC CTGTTTGTCA CC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23363820 [Map]; Strand: w
      • AT3G63233.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -2131; Region: intergenic
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 52; Region: intergenic
    Flanking Genome Sequence: 54-0391-2 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGTGTGTCAC ACAATGTCAA GGGGTAAAAC AAATAGTATT TAATAAGTAA 
    ATTCGATCTT CAAAGTGAGA ATTCAAAAAA AGAGAGTCAA ACTCGAAGAA 
    TGATATTCTT TATTTGTACG TTTCGATTCT ACAATTGGCT TTTTTTTCTT 
    TCCCTAAAAC AAAAGGCACT TCCTCAATAT TGGGCTTTCC CTAAGTTTGA 
    AAACTTAATT ATGTTATTTT TCTGGTCAAG ACATGTATGA TTCTATCAAT 
    AACACACATG AAAAGAAAAA AAAAAATNNT TNGTTNTTAA TNCCCGATTC 
    TTTTCCTAAN CCTAAAAAAC NNNNNCCNCN NAAAAAATAA AAANGGGGGC 
    NAANTTTTNG NNANCTTCAA AGNGTAAAAN AAAAATCCCC NCCNTNNNTA 
    AAAACCAGNG GGNNTNTTNA TNGNGTTTNA ACANCANCNT TATTTNANNN 
    AATTNNCCNT TGGGGGGNAA NAAAANNCCN CCCCCNANCG GNGGTTNTGN 
    NTTTCCNNCC CTTNTNTNTG GGGGGCCTTN AAAAAAANNG NTTNTTNNNA 
    ANCCCCCCAN NNAANNGCNG GGGGGGNNCC CCCCCCNNNN NNTTGGGGGG 
    GGCNCNNNNN CCCCCNGGNG GGGNNNNNNN ANANNGNNNN GGGGGGNAAN 
    AAAAANAAAA NAAACACCCC ACTNTTTTNC NCNNNNG

AT3G63233.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63240.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR