1. Home
  2. Mutant Lines
  3. 54-0222-2

54-0222-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19466874 [Map]; Strand: c
      • AT2G47430.1 - [+] show detail - Signal transduction histidine kinase
        Distance: -2787; Region: intergenic
      • AT2G47440.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -2845; Region: intergenic
    Flanking Genome Sequence: 54-0222-2 - 3-prime edge 
    TCCTNGGATC CNAANATGCT TGNAGAATGG GGACCGNTAA TNACGTTTAG 
    NNTNACCTAN AGCTATTTGA AAACTTAACT AAGGATGATA AAATGAAATG 
    AGTATAGTAA AATATCTTCT CGATATATGT CATTATAATA ACAGATAGAT 
    TCCNTTTNNT TTAAATTTAC TCGAACCATC CTGGCAAAAT CTGTGACCAC 
    TAGCTTTAAA CCTAACGTCT TCATCAATGA CAGTGTCTGA TATATATGTA 
    TATGAGAATA AATTTATAAT TTCTCCCCTG TACGTTAACG TTGTGTCTCA 
    ATGTAATTAT AATTACTATT AGCTCACGTA ATGAGTGCAG GATTAAGATT 
    ATTGAATTCG AAATGAATAT ATTTGGACTC AC

AT2G47430.1

Model type
Protein coding
Short Description
Signal transduction histidine kinase
Curator Summary
Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.
Computational Description
CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47440.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link
InterPro Scan - TAIR