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54-0158-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23120653 [Map]; Strand: w
      • AT3G62500.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0158-1 - 5-prime edge 
    NTTCTCCGCT ATAGCTCAAG CTCCTTGACC AGTAGAGAAG AATCTCAACA 
    AGTGTGCTCT GACCAGTCCA AGTCTTCGCG TGGCAGAGTT CGAGCGGTTC 
    CTTCAAGGTT CAGGGACTCC ATTGTTGGTA CATGGAAATC CTTGAAGAGT 
    CGCAAGGAAG AGTCGACGGA GACATGTATC TGGGGAAGCT CGAAATTGCA 
    TCGAAGCAAA GACCCGAAGC TGTTTCCACG TAAGGATAAC GAAGACAGCA 
    GCGAAGTAGA TTGCGATTAC TGGGATGCTA ACTTTGGTAT GCCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 3497431 [Map]; Strand: c
      • AT2G07765.1 - [+] show detail - pre-tRNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-0158-1 - 3-prime edge 
    CTCAACGCGC CGANCTTGTC NACCCATNTT TCTNTCTNAT TCTAATCCNA 
    GCTNATGCCN GCCNTGCNTG TGGTGATCTG GAATCCATTA AAANCCTTCN 
    CTTACTTNTG TAATGGNNGC GGCAACGTNA CAAATNCGNA NCCTNCTTCG 
    NNGGGATANC NAGTCCGGNN CGTCCAACAT NACAGAGGAC CNGGGCAATC 
    GCCCTCTTTT TTAATGAAGA AGCGGGCTAN TNCCCNAAAA TGCCCNTTAA 
    TCAAGCAAGT TGGGGANAAA ATCTTACCTA TTATACGGAA CACGAGGAGG 
    TGAACTGCCG GAACANGAGG ACTTNAANCN NAGGAAANAN NAAGGGNGGC 
    TAANGGANCT TGCTTCAGNN GGAGTGTGCT GAAAGGTGGC TTCATACAAA 
    AAGAAAGAAA NTAGTGTGCN GCAGGANAGA ACAAAGANAG AAGGTTNACA 
    ANACGNTANT NGCTTCTTAN AANAANTATN TNTCGANNGA GATNGAACNG 
    GNTAGGNGNG GTTACCCCCC AAACTANACA CTTCTGANGT GCANANTCCT 
    GCCNTTTNCT TTNNGGNGGG NNGNGNNATN GNATNTGTTA ATTCCCNTTC 
    NTTATANCCN TCTCNNGTAN CCATNACAAA NGACCTGGCA CCCATNTTCT 
    TTTCTTACCT NNCNCCCNAA ANAAAAGGGA GNAAGCTCTT CNTNNTTNTN 
    TNTNNACNGA ACATGANACT GNGGNCTANT TTGTCCTNCN CNCNNNNNAA 
    NGGNATCNNN CANNNNNCAC TTNCTTCTTN TTNNTTNGAN AGGTTANCNA 
    TANCCCCTCN CCCTCANTNN NAANANAGNN NNNGN

AT2G07765.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Tyr (anticodon: GTA)
Link
InterPro Scan - TAIR

AT3G62500.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR