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54-0072-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59806 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -520; Region: promoter
    Flanking Genome Sequence: 54-0072-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACCGT 
    GACAAATCAC CCAATCCATT GTACGAGCTA AACCACATAT TGCAGTGCTT 
    ATATTAATTT GTGTTTCCTT TTTTTTTTTT TTTTTTNGGC CCGGNCNNAA 
    TTNAAATTTN NAAANTNAAA NNANGGGGNA AAAAAAACNT TNTTTTTTTG 
    GGGGGCCCCN NAAAAANNTT NNNTTNNNTT TNNGGGNTTT ANCCNANNNN 
    NAAACAAANN GNNNNTTTTT TTNNAAANNT TTTNNNCCNC NTTNNAAAAA 
    AANNGGGGGT TTTTTTTTTT TNCCGGGNTN NAAAAAANNN CNTTTTTTNG 
    GGNNNNTTTT TTTNNNGNNG GNAAAAANGG GNNNNAAANN NGGNNANNNG 
    NNTTTTTTNG GGNNNANTTN AANCCCCCAA AAANNGNAAA AAAANNGGGG 
    GGGNNCNTTT TTTGGNCCNN NNNGGGGGGN CCCCCCCCCC CCNTTTTTNC 
    CCTTTNNAAA NTTTNCCCCC CGGGGNAANC CCNTTTNNNA ANAAANGNAN 
    AANNCCCNCC AAAAAANCCC CNAAAAAAAN GGGGGGGGTT TTNNNNAAAA 
    NNAANNNAAA NNNNCCCCTT TTTNNNNNNN NGGGGGNNNG GNNNNTTTNN 
    NGGGTTTNNN NAAAAANAAA AAANNTTTTT TTTTTTTNGC NNNCCNNTTT 
    TTTNTTTTAA NCCTNTTTNA AAAAAAAAAA AAGGNTTNNC CNCNCCCNGN 
    CTNCGGCCNT

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR