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53-4562-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24790449 [Map]; Strand: c
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 53-4562-1 - 5-prime edge 
    CTGGCATGGA CCCTATCACG AGGAGACATG TGTGGGACAT TATACAAGAG 
    TCAAAGAAAG GTCGTGCCAT CATACTAACG ACGCATTCTA TGGAGGAAGC 
    TGATATTTTA AGTGATCGAA TAGGGATCAT GGCTAAAGGC AGGCTCCGCT 
    GCATTGGAAC CTCAATCAGG TTAAAATCTC GCTTTGGCAC GGGATTTGTT 
    GCTACCGTTA GCTTCATCGA AAACAAAAAT GACAATAACA TCGGTGTTGG 
    AGCTTCGCAC GAGCCATTGA AGAAATTCTT TAAAGAGGTA ACATACACTC 
    AAAAGTATAC TAGCAAAAAA AAAAAAAAAA AANNNTAAGG GNNCCTTTTT 
    TNNCNCNTTT NAAANNNGGC CCCNNNAAAA AAAAAAAANT TTCCNNCCCG 
    GGNCCGNAAN CCCGNNNNNN NTTTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24790565 [Map]; Strand: c
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 53-4562-1 - 3-prime edge 
    CATGCCAGTA GTCTAGAATC CATGTATAAA CAACCATCTT AAAATTAATT 
    GTTTTTATAT ATAGACACAT ATTTAAAGAA GAATGTAGCA AGTTGACATG 
    CCGGTTCATC TAGGAAGACC AGCTTGGGAT CGCCGATAAG TGCTACCGCA 
    ACACTGAGTC GACGTTTCAT TCCACCACTG TAACTTCCTG CTCTAACTTT 
    CGCCGCTCCT GTCAGTTTTA CATCCGCCAG TAACTTCTCA GCAGTCTATA 
    ACAGAAACGA AACTTGTAAG ATAAGTTGCA TGGATTGGAA AGTTCAATAA 
    AATCATCAGA CCTCTTTGCA CTTTGAGATT TTTCAGTCGG CCTACCGATT 
    TGATCGATGC TGGTGGCAAC CCTTTGATGC TAGCAAAGAG GTGGAGGTGT 
    TGTTCACTAG ACAAAGCATC CCAAAGAATA TCAAACTATA AAAAAAGAAA 
    AACGTGTAAG AGATGATTGT ATAAGAGAGA ATGCTAGAAA CATTTATGAG 
    ATTGATACTT ACCTGAGGAC ACACTCCTAT CATTTTGCGA ATGTTAGATA 
    TACCCACAGA ACTTCTTATG GAGTCTCCAT ATATAAGAGC TGTTTAAGTC 
    AATCACATGG ATATTATTAG AATGGTTAAA AATGCTTTGA GAACTTTTTG 
    CTTCCTCTCT AAACAGATAC TTACCATCAC CACCAGTAAC TGGATTTATG 
    CCAGTCAAAC AACTAT

AT5G61690.1

Model type
Protein coding
Short Description
ABC2 homolog 15
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 15 (ATH15); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR