1. Home
  2. Mutant Lines
  3. 53-4381-1

53-4381-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24794020 [Map]; Strand: c
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: -533; Region: promoter
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4381-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CTGCCATTTC AGGGTTCAGG CAATTAGATC 
    GTTATAAAAA AAAATATTCT AAGTAACTTG CCGGAAACGG CAATATGAAA 
    ACATACCTGG TAGGTTAAGT TCTTCCTAAG TAACGCATTG GCTTGCGTCC 
    AAAAACTTGC TGGGCTAGGA TTCACCATTG ATGAAGAAAG AAAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24794018 [Map]; Strand: c
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: -531; Region: promoter
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4381-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCGGCTC 
    ATATGTTTGA AACACATATG GACGAATGTT CGGCTCATCC TGGTTCCACT 
    CTTCCTCTGT TTAATTCTGC TGGCGATTCA ACAAGTGCTT GATGCCTTGA 
    TGAAGGGTGT CTCTGATATG TCTAATTGTG GAGGCAACGT TACTTTGCCT 
    GGTGGTATCT GTCCCATCCC AAACCCTCCA TCGTTGCCTC CGATGTTGCA 
    GATTCCACAA CATGAACTCC GTTCCGTTAA GACCGATTTC TTTTCCTACA 
    AAGATCTCCC TGACAAGTTA TGCAGAGAAA CAGGTTCTTG TCCCGTAACG 
    ATACTTTTCA CTGGTGATAA ACTGCCCCTT GGAAAAGCT

AT5G61690.1

Model type
Protein coding
Short Description
ABC2 homolog 15
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 15 (ATH15); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61700.1

Model type
Protein coding
Short Description
ABC2 homolog 16
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 16 (ATH16); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 14 (TAIR:AT5G61740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR