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53-4159-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 234198 [Map]; Strand: w
      • AT2G01510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -1692; Region: intergenic
      • AT2G01520.1 - [+] show detail - MLP-like protein 328
        Distance: -1727; Region: intergenic
    Flanking Genome Sequence: 53-4159-1 - 5-prime edge 
    TTTAAAGGCA TGTTCTTTGA TTGTTGGGGT GATTATAAAA TCATTTTTCT 
    TGTACCATTT TTTTTTTCNA CCACTNATNG NAAAANGTAA NCAATCTNCG 
    GCCGGGNANA NATAATNACC TAATTGGGCC ANANAANCGN ACCTNAGNCN 
    ATAGNAAATA ANGTNAAAAA AANGGNCNAT AGTAAAAAAT NNAGGNANGG 
    GTAANNATNN NCNTANNACT TCTNATNCNN CCNNAAAGAA NGTNTAAANG 
    TCNGTTNNCA NGCGTAAANN ATNGAACCGT AACCATNTTN AATTNANTTT 
    TAANAAAANN TNTCNTTAAN TAAATNANAN NAANGTTTTN NATTTNANAN 
    CCNAAACANG GNCGNGNANC CCCNCCANNA GAAAANGGGG NNCTGCCCCC 
    CNTNCNTAAN AAAAAAAAAN NGGGGGNNNN TNGTTTCNAA AAAAAANTGA 
    ACCNNNNAAG GNTGGAATAG GGGGGGNCNA AAAAAAGNNN AGGNGGGGNA 
    ACCNGNANAA AAAAAAAAAA CCCCNCNNCC CNNANTGGGN NNNNGGGGGG 
    CNNCCCCCNC CAAAACCGNA NGGNCCNNCC NNTTTATTTT ATANCGCNGG 
    GGGGGGGGGN NAAANNNNCT TTTNGNTTNN NNGNAAAAAA AAAANAGGCC 
    NGNNGGGGGG GNAAAAACCC CCCTTTTNGT TTTTTNTTGG NNTATAAANC 
    CGCCCCNCCN CNANCCAAAN NNNCCCNCNN AANAAAAAAA AAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 234116 [Map]; Strand: w
      • AT2G01510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -1610; Region: intergenic
      • AT2G01520.1 - [+] show detail - MLP-like protein 328
        Distance: -1809; Region: intergenic
    Flanking Genome Sequence: 53-4159-1 - 3-prime edge 
    CCTTTAAAGA TCTGATATTG GACCGGCTAA TTTCTTAACA ATTTGATGAA 
    ATTTATATAA ATATTCACAT ATATCAAAAT ATAGATGAAT AAAAAACTAC 
    AGTAGATAGA TGAATATAAG GCTATATAAA AATATAAATT TTAACATATT 
    AATTTTACTA CAATTACTAA TAAAGTAATA ATACTAATTT TATTACACCA 
    CTAATATGAA TCCATTGCAT TGTTTCATAA AATTTTGTTC AGATCCAGTT 
    CTGGATATGC ACAAATGATT AGAGTTGAAG GAGCACACCT TTATGTCTTT 
    CGGGTGCATG TTCAGTCTTA GCAATGCCCA TGTCATATAT TTTCGCAATT 
    AGGGTCCTCC CATCATGCAT AATCATCATG TTCTCAAGTC TCAACTCTTG 
    ATGGATTATA TGTAATCTGT GCAAGTGTTC AAGAAGTAAA ACAATATTTC 
    TGGTTTACTA TGCAAATGTT CAAGAGGTAA AACAATATTT CTGGTTCACA 
    AAAAATATTC CAGAAATATA AGTATAAAAG TAATCGAAGA TTATTTACAT 
    TTTACAATGA GAACTGCAAT TAGATATGTA CACACATAGA AAGATTATTT 
    ATATTTTGCC GTAGAACCAC AAAACAACAC AGAACAAATT ATTTTTTAAA 
    CATTTTTGGT TTATTTTGGG GGTCTACTAT TTTTAAGATT CTTAAAGGCA 
    TGATATTGAC CCATTAATTC NTTACCATTT AATGGGATAT ATAAAN

AT2G01510.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 35573 Blast hits to 13630 proteins in 255 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 94; Plants - 34882; Viruses - 0; Other Eukaryotes - 514 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01520.1

Model type
Protein coding
Short Description
MLP-like protein 328
Computational Description
MLP-like protein 328 (MLP328); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to zinc ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G14060.1); Has 369 Blast hits to 340 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 369; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR