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Mutant Lines
53-4114-1

53-4114-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 23642724 [Map]; Strand: c
- AT5G58480.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
  Distance: 0; Region: exon1 (CDS)
- AT5G58490.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: -294; Region: promoter

CCGNCNCGGN AGGGTTGAGC TTGACGGGAA CAACCGACAG AGCAGTNGGC 
ATAAATTGGG GGACAGAAGC TGTNNCACCC TCTTCCGCCT TNAAAGGTTG 
TAGAGCTTCT GAAATCAAAC GGCATTGTCA AAGTGAANCT CTTCGATGCC 
GACCCAAAAG TNCTCCNAGC TCTCTCTGGT TCTAATATTG GTGTCACTAT 
CGGAATCCAA AATTCGATGC TCAANAGCTT GAATGCATCC GTAAAGGTAG 
CAGAGAGCTG GGTACATGAC AATGTCACTC GTTACTTCAN CGGNGGAAAC 
AGAGTTCGAA TCGAGTATCT TCTTTCTCCT TCTCTTCTGC TTATCCAGTT 
ATATATATAT ATAGATNAAA GATTTTNAAG CNGGANTTTA ACTTATGGAA 
TNNGAAGGNN TCNNATTTTT TGAAATGCAA AAGAGCCNGN TTTGTTTTNG 
NGNNANAATG CCAATANATT TATTGGGANA TTCCCGTNTG NAAAAAAAAG 
AGAANANCCC NTTTNNNNNA GANGGGAGAA GAGNCNTTTC CNCNGAGGNN 
GNNGGANNCA NTTTNAACGN TGGGAGAGNG GGGCAAAANN NAACCTCCCN 
NNNNGGNNNG GAAGNGNNAA NNNGGGNNAN GAGGGGGGGG TGNAANCCNN 
NANNNTNNNN NNTNNTNTNN NAAANNGGNN TTNANNNNNN NGAAAAAAAN 
AAANANANAA

3 prime edge [+] show sequence

Chromosome: 4; Position: 194417 [Map]; Strand: w
- AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
  Distance: 0; Region: exon1 (5UTR)
- AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
  Distance: 0; Region: exon1 (5UTR)
- AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
  Distance: 0; Region: exon1 (5UTR)

CTCCTGAACC AGCTTTGATC GCCGGACAAA ACGGNNGANG ANGAAGAAGA 
AGANGATTGA GATTTCTTCA NAGNCAAGGC CGAGAGAGAG AGAATGANGA 
AGATNAAGCA AAATGATNGC TTATANAGTN GAAAACAGAG GAAAAGTTGA 
TGATCCAATC TCCANGCCAC ATTGTTTCAT CTGACAACTT TTCCAGGTTC 
TGTCTGATAA AAACCCCCNC AAGCTNGGTT AGTGTTTTAG AGTCGACTAA 
GGACTTGATG TCATGTGTAT GATNGANTAT AAGAATTTNN ACCGCNCCCG 
GATCTTANAG GCGTNNGAAT TGTATNCTTG TNANANNACA CACAGACAAA 
GACTCATACG GNCTTNGACT ACACCATCNA AGCT

AT4G00440.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00440.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00440.3

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G58480.1

Model type: Protein coding
Short Description: O-Glycosyl hydrolases family 17 protein
Computational Description: O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G17180.1); Has 2632 Blast hits to 2560 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 17; Plants - 2601; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G58490.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR