Home
Mutant Lines
53-4113-1

53-4113-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 99136 [Map]; Strand: c
- AT2G01140.1 - [+] show detail - Aldolase superfamily protein
  Distance: -2481; Region: intergenic
- AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
  Distance: -1513; Region: intergenic

GGTGTAGGTG TGTGGTTTAG TCATCGATAT AGCCAACCAG TGACAACCAC 
CTCGACTCTC TTTGACCTAA TTATTTGACC ACTCCTTCCA CTTTACATCA 
TAAAATCTGA AACCACTTAC CATCTCTCGT CACATAGCTA GCAGACGATC 
GTCTTCATTA TGTGGTTGTG ACTCTCATTC TAATGTAATC CTGGTAAAAA 
TAGCATGCGA GTGTCTTATC GATCCTCGTT GTTTATATGA TAAATCATTT 
ATTATAAAAT AAACAAAACA CAACTAATAT TTTTTGCATT AAAAATTTAA 
AATATTTTAA GAGGAGTGAT TGTTTCGACG AAAATATATT TTATATAGTA 
TGAACATGAA TGAGTAAAAG GTAACTCATT TTGGTGTGTG TGTCAAATTT 
TGATTTTAAG TTTTTTTTGT TTGTTTGTTA AGTGTATCAA CGAATCTATA 
GTTCTAGCTT TGATACCAAC TGAAGTAGCG GAAGTTTTAA TGGATAAAAC 
TAGACATCCG TTGATTTCTC GGAATACCAG AAAACTAGAG TTTTTTGGAT 
CTGTTGATTC CTCAGAATAA CAGAAACGAG AGAACGTAAG GAATTCGTTG 
ATTCTCTNNG AATACCGATN CNNNCNNTTT TTTATAACCG NTGAAATCTT 
TCAAGAANCT ACCNAAGCNN GGNATTANAG AATACTNT

3 prime edge [+] show sequence

Chromosome: 2; Position: 99232 [Map]; Strand: c
- AT2G01140.1 - [+] show detail - Aldolase superfamily protein
  Distance: -2577; Region: intergenic
- AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
  Distance: -1417; Region: intergenic

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTATTTATG 
TTTTCTGAAT AACTTAATAC TATCTTATAT GATCGTTAGT AACAAATATT 
TTTTTTTTTA AAATNANGTC CATNCATNGG GNNCCCNAAG GGANCAAATC 
CTNGANTTTT NTNGCGNCAN TNTAAANCTA AAANCNTCCN TCCTTGANCC 
ANAAGGANTT TNNGTTNNTN TTAAATTTNC GNCNCAGGGG AAACAAAAAN 
CNAACCGNGG ANCGGNCTAA AANNTNGGCN AAGTNCNCAA ATNNTNAATG 
GCTTTNTNTN TNAANCANTC TCNCCCAANG GNGGGATAAT TAAATTAGTG 
GGTCCCCNGC CNGTGGTTAN TTAAAANTTA NNCNCAANCC CCCCNCTNCC 
TTTTTNTTTN CCAAAAANGC TNNNCCAANG TNCTNCCCTT AAGTTTNTNA 
NNTAATNAAA GGAACCNNTN AANGNNTAAA ANANTNGAAN CNTCCTTTTN 
ANCTACCTAC CTGGGGGGAT TNGNAAATAN TNTAANAANG GTGAAACCAC 
CCNGGGCCGT AANCCACCCN GGCCCCCNAA AANNNNNNNG GGG

AT2G01140.1

Model type: Protein coding
Short Description: Aldolase superfamily protein
Computational Description: Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01150.1

Model type: Protein coding
Short Description: RING-H2 finger protein 2B
Curator Summary: Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description: RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link: InterPro Scan - TAIR