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Mutant Lines
53-4076-1

53-4076-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 55383 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -1934; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 1816; Region: intergenic

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TATAACCTCA TATATTGTGA TACAACGAAA 
GGCACCGGAT GGTGGAACGC ATCACGCATC ATGCATCCTC GATCCCTTTT 
CAAAGTGGTA TGTAAGAGAT CATTATTTCA ACATAACATA CATTTGCTAT 
GATGACGCAT TTTAGTCAAA TTAGTTGTTT GTTCAATCAT ATTAATAAGG 
GTCAACAGAT ATTTATACGA ACTGTAATTA AAATGATAAA ATCCAAAGCG 
ACAAGTTTGC TACTACCAAA TGTGTGTTTA ATATATATAA TTTAGAAACA 
TTGAATTTGA GAAAATGAGT ATACGGTTGC ACAAAAGAAG AAGAAGAAGA 
GGAGTATACC AACAAAAGGT TGTACGTAAT ATAATTCCGA CCCCCTAAAA 
AGATATATAA TAAGGTGGAG AGCGAGGGAT CTGAAATTGA TGGGTGTGTT 
TTTGTGTGCA TAACAAAAGT TAAAAATGTA TTTATATTAT TTTTAATTTT 
AAAATTCTTT TCTTACTTGT GTTTATTTAT TAGTTAAATA AATAATTTAA 
TGAGAGAAGC T

3 prime edge [+] show sequence

Chromosome: 4; Position: 55385 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -1936; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 1814; Region: intergenic

TTTGANNACG GTAGAGGTAT TTTANCGANC GTTACCGACC GTTTTCATCC 
TNTTNGTGCC ATCGTTTATN AACCAATTGT TGGAAATNTG GAATTATATA 
CATATACATT TAACGCACAA TATCAACATT GCAATACTCG NAGTGATTGA 
NATTTTGGAC GTAGAAGTTT TTAACAACTA ATANTAAAAT ACTTTGANAA 
ACAGTGGGAT GATGGAAGAC AGATGTGAGT TAAAGTCTGA TTATAACNAA 
ATCAAAATCT TCCTAACTCC TAGGAGAGTC TTCTTTGAGA CAAAAGTACA 
TATGCGGTGT CTAAAAGGAG TAAAAGAAAA ATGATAACTC AATTAGTTGA 
AGGACAAATA ACACCAAAAG CTGCGTATTT TATCATCATT TTACTTTTTG 
TAAGCAATGA ATANAAAAAA GCAATGAATA GCCTGTTGTT ATTCATTTCT 
TAATGACATG TCACACATAC AATATAGTGA AAGATGAANC CCAGCAAACA 
AAAAAAAAGG GAAAAAAAGG TTGNATANCT TTNTANNNNG TNTTNCCCNG 
NCCNTNTTTT TANNAAAAGN ANNCTTCANT GGGGNATAAT ACCCNTTTCC 
CCCTTGGCAC CTTAGGCNTT TGTTANGGGT TAAANNCTTT TTNCAAAANT 
AAATNGNNAA NAAATNCTTT CANNCNCNNG NTTGTTTTTT AAATNNGGAA 
ACCCGTGAGT GNTAAGGTAN NAGTNTTNTT AATATTTTTT TNCANGGATT 
GNNTTACATC ATTTTAATTC NTA

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR