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53-3930-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57800 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3930-1 - 5-prime edge 
    TCCGTTTCGT GAAGCATCTA TCTCCGACGA TCATCGTCTG CTCCGACAGA 
    GGATGCGAGA GGACGGATCT GCCCTTCTCT CAACAGCTCG CCCACTCGCT 
    GCACTCACAC ACCGCTCTCT TCGAATCCCT CGACGCCGTC AACGCCAACC 
    TCGACGCAAT GCAGAAGATC GAGAGGTTTC TTATACAGCC GGAGATAGAG 
    AAGCTGGTGT TGGATCGTAG CCGTCCGATA GAAAGGCCGA TGATGACGTG 
    GCAAGCGATG TTTCTACAGA TGGGTTTCTC ACCGGTGACG CACAGTAACT 
    TCACGGAGTC TCAAGCCGAG TGTTTAGTCC AACGGACGCC AGTGAGAGGC 
    TTTCACGTCG AGAAGAAACA TAACTCACTT CTCCTATGTT GGCAAAGGAC 
    AGAACTCGTC GGAGTTTCAG CATGGAGATG TCGCTCCTCC TGATTTCCAC 
    CGGAGTTTCA ATTATTAAAA AAATATTTTC CTTAATTCAA TTTATCTTAA 
    ATGACAAATT TTTAGTTTCT GATTTTATTT TGCTCAGTGC GATGGATTTT 
    TAAATTTAAG TTTCACACAA ATATATAAAT TTTTGTGAGA AGTTAATTAA 
    TTGTCTGATT ATCAAACACT TATTGTATAA CACATTCAAT ATATATTAAT 
    TGTGGGGATT ATTTTTGATC GACTAAATAA CGTGATAGAA TAATGCTTGG 
    ATTAGCTCAA TA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57916 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3930-1 - 3-prime edge 
    GAAACGGAGG ACCAAAGGGA GGTGCGAGAA GGACGCGGCG GAGATGTTAA 
    CGGCGACAGC TTCTTTCTCC GACGAGTTAG GCCACGAGAT GGAGCCGAGG 
    AGGTCTAAGC TCAAAACTTG GATGTCAAGG GAGATGTTGA TCTCAGAGGC 
    GAAGTGCNTT GAGGTTGTCT TTGAGTGAAG CCAAGTTCGA GCTGGTCGTG 
    GTTCGCCGGA GAAGCGAAAA CGGTGATCTT GAGGGAGAGA GGAGCNGGCG 
    TTGTCGCGGA GAACAAGCTC TTGCATGAGG GAAGCCCATT GGCCACCGTA 
    GCCGATATCG AAGTCGATGA TGTGGAGACG GTGGAAGCCA TGGAAGGACT 
    CTAAGAGGGC TTGGTTGGAG GTAAAGTTGG CGAACTGAAG AACGGGAGAG 
    ATCTCTGAGA AGGATTTGTA AGCAGCGATC TTGAAGATGA GGGAATAAGG 
    GTTTAGGGTT TGGGAGACGT TGTGAAGGAG ATTATTGAGA GCTTCTTTGA 
    AGTAAAAAGC TGCTCTTTCT AATGGCTTCC CGACGGGAGA AGAGAGCTGT 
    TGATTGAGCC GCGCCAATAT CCCCTGAGCT AGACACGTGT CGCTCTCTAT 
    GACCTCTGCT GCCTTAACCA GCTGCTCTGT TATCCCCACG GGACCAGGGT 
    TGAGCCGCTT TGCCGGCCGG ANGTGTATGG GTGGTGGTGG CCGTANAAGA 
    TACCNCAGGA TTCTGTGTGT ANTGGGTTTT GAC

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR