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53-3810-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 100990 [Map]; Strand: c
      • AT4G00232.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -269; Region: promoter
      • AT4G00234.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel prot...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3810-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACGACGAATG GCTTAAGTAA TTGAAAGGCT 
    TAGCATCATT ATGCAGGCGT ATATTCGATG AAAAGGAGAT CATCGAAGGA 
    GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 101040 [Map]; Strand: c
      • AT4G00232.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -319; Region: promoter
      • AT4G00234.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel prot...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3810-1 - 3-prime edge 
    TCGTACGCAC GAGCTTTCAG CTCCAAATCT GATGATTTCG GAAGTATTGT 
    AGCATCTGGT GTTACTGGGT CTGGTGATGG GAATGGGAAT GATTGGGTTG 
    AGAAAGCTAA AGATGTGTTG CAGACTAGTG TCAATGCTTG TTGCTGAGAC 
    TGCAAAGAAG ACTAAAGATG TCTCTGATGA GATGATTCCT CATGTTCAGC 
    AGTTCCTTGA CTCTAACCCG TATCTCAAAG ATGTTATAGT TCCTGTTAGT 
    CTCACTGTTA CTGGTACTTT ATTTGCTTGG ATAGTGATGC CTAGGATTCT 
    TAGAAGGTTT CACACTTATG CTATGCAAAG TTCCGCTAAA CTGCTTCCCG 
    TTGGCTTCTC TAATGAAGAC ATTCCTTATG AGAAAAGCT

AT4G00232.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT5G41765.1); Has 109 Blast hits to 109 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00234.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel protein (TAIR:AT4G00290.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR