1. Home
  2. Mutant Lines
  3. 53-3805-1

53-3805-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048798 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-3805-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TATTATATTC TCTCTTGNTA ACTTTAGGGA 
    CTTGNCGAAT AATAACTNGA CCGGAGAGGT GCCAGAATTT NTAANCAACA 
    TGAAATCGCG TGTTGGTCAT GTAAGTNTCT CGCAAAAACA TATTTTCCAA 
    AATGCTTTTC ACATTCCACC TTGGATCATG TTCATGCATG TATCACAATT 
    TCTCTTTTTT TTTTGCNAAA ACTTAANCGG GANCNATNTT AACGGGACAA 
    TTCCTNAATN TTTACAAAGG AAAGGACTTG NCCTACTGTN NAAAGCTNCN 
    AGNCNGGGCC GCAAACCACN CNGCNCCTGT ACTTACGGNC GTGGNTCCNA 
    AAGCGCCTGA GAAGAAGCCT GCAAGTNAAG TCCATCGATA TCTCCGGGGC 
    TAATTGAATA TGAAGATGAA GATGAAATAT TTGGTGTGTC AAATAAAAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048788 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-3805-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TTACATAACA TTTTTTTTTT GCNTACNCGT AACATTNGAT CAGCANCAAN 
    ACATACTTAC AGCTTTTNTA GNGTCGNAAN ATTTTGAANG GCAGCTGCTA 
    TCGTTCCAGT TAAACCACTT GATGACAAGT TTCTGGNGAA ATTTCCAAAN 
    CCATNTTCAA TAATATGATC ATGATCACTT ATANATCCTG ATGNGTNTNC 
    TAGNGAACTA ANGGCTTACA AAGTAGNGAT TCTNGGNGGC GNGGTTATAT 
    CTGNGATGCT GCAGTTNAAA CCATCCCACA TAAACTGTTG AGGGACNCAT 
    GGATCGNTTT GCCAGTNGAT TNTACTCAAT TCATAGGAAG CT

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR