1. Home
  2. Mutant Lines
  3. 53-3743-1

53-3743-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462651 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3743-1 - 5-prime edge 
    TCGATGATGG TGTCTCCATT ACGATTTACT AAGAATCTAT TGAATCCGAT 
    AAGCACAGAA AGAGTAATTT CTGGGAAATT AAGCAGAGGA GAAGAGAAAG 
    AANACTCTAT TATATGAGAG AATCAGACAA GTGATTGTGG CGTTTGGGAA 
    TTTGGGTAAA GTATAAATAA ACAGGGGTAT TGAAACGCTG TGAAGGGTTT 
    TTGAAAGAAA GTAGCCGTTG GGTACAGAAA TGGAAGGAGC CGTTTATCAA 
    ACTAGCCGTT GTGTTATTTC CTTCGCTGAA TTATGGACTT TTTCGTCCCT 
    AAAAAGGCCA TGATTAAAAG CCCACACTAT TACATTAGAT TTTGGAAGGC 
    CCACCTCTTT TATTTGATCA CTGATTTTTT CATTAACACA AAATCATCTT 
    TCATAATCTT TAGAATCTTA CTAAAAACAT AAAACTGTCT TAATTAAGTC 
    ACAACAATCT TTATTTTAGC TGTCATCATA AGTCACATAA CATCCTCCGC 
    TGGCTTCATT TTCTAAAATT ATTCAAGATT GGGCGAGTTG GAATAGTTTC 
    AATTTTTTGT AGCTACGTTG ACGTTAGCTT CGTTGTACGG GTCTTTTTTG 
    TTCATCAGCT TAGATAATCT CTCAGCGAGG CTCTTCCTTG TCGCANGGGA 
    TACACCATTC TTNCCTATCA TCGACTCAAG AACTGCCTCA CCCAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462767 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon5 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3743-1 - 3-prime edge 
    ATCATCGACA AGAAGAGTCA CGAGATCTCA GACCCGCTCT GCTATCAATA 
    ATCTCTTATC CTCAAGTAAG TCTCCATAGT CCGATTCCCT GATTTTGTTT 
    ATTGAGTCGG ACTATTGTTT CTGGATCTGA TCGTTTATAA TTTATCTCCT 
    ACAGAGAAAG CNGGATGATT GGTCAGATAA ATGTCAATCG AAGTCGGTAC 
    AAAGAAACGG TGCAAAAGAC AGGTCTGCGT TGTTTGACAT AACCAACGAC 
    TCACCGATCG TAGGTCTGGC GATGCAGACA CCGTCCTCAG GAGTTGTTGG 
    GAAGAGGAAC ATGAGCAGAA TCAATAACAC TCCTGGATCT GGTGAGGCTC 
    TCTTGAGAGG CCAAGTCAAG ACTCTCTTGC AGAAGGTTGA GGAAGAAGCA 
    GATCTCACCA AGATTTCGTT GGAATCTCGT CCTTTCATCC ATCTCGTTAC 
    TTCTCCCATG GGTCTTCTCG CCCCAACTCC GGCCAACACC CCCCAAGTTC 
    TTGGTTTCTC AGACGAAGTG CAGGTTGTGA TCACTTCTCC GGTAGTTGCA 
    GGACAATTCA GAGCACCGTC TCAGGTAAAA CTAGATTTGT ATATGTTTTT 
    TGCTGATAGA TGGAAGATTC TTGGGGAATG ATAAGAAGAT GTTAACTTGG 
    TTTTTATTCT TGCAGGGTGG TGGAAAGCAA CATGTTTGAT GAGAAAGAAG 
    AAAGCTACCA GCCCGGC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR