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Mutant Lines
53-3663-1

53-3663-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24788627 [Map]; Strand: c
  - AT5G61680.1 - [+] show detail - Pectin lyase-like superfamily protein
    Distance: -612; Region: promoter
Flanking Genome Sequence: 53-3663-1 - 5-prime edge
```
ACATACTTTT TTTNGGTNGA ATAAAAAATA ACACTATTTT NGATCAAANG 
AACTATGAAG TTCCTAACAA TGGTATTACG GACATCTTCA TCTAACC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 24788749 [Map]; Strand: c
- AT5G61680.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: -734; Region: promoter

GTTTACATCA TATGCAAGTT GCAACCTTGG ATAAAATTCA AAGCTGAAAA 
GAAAATAGAA AGAGTTTGAA AGTGAAAACA GGGCAATTTC TATAGCCCGT 
CCTCTAGAAT CAGATTGTCG TGTCCCCTGA TGGAGCATAA TCTCTTGCGG 
ACTACACNGA TCAACGAGAT TGGCGACATA TTCAGGAGGG TTCGGGACCT 
CACTGTGTCG TCTAGAATTA TNTACCCACG A

AT5G61680.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Computational Description: Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G69940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR