1. Home
  2. Mutant Lines
  3. 53-3366-1

53-3366-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100819 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3366-1 - 5-prime edge 
    GAGAAGAGGC GATTTAGGTT GAGCTGGTCG GCGAGGACGC TGAGGTTTGA 
    AGTAACAACA ACAACGGGGG CAGAAGAAGG GAAGAGGAGA AGAGACCGGA 
    CGTGTCTGAA GAAAGTTGCG AGGAGAGCCA GTAGCATCAG TGGGATCGAA 
    TCTGATGACA CGTCGGAGAG CTGACCTTGT AGTCCCATTG ATATGGTTNT 
    AGAGATTGTT TTTGTTTCTT TGGTTCTTGT TGTTGTTCTT GCTGCATATA 
    CTACCTTGCA TCTCATCTCT TTCTTCTTCT TTATATGGAT GGAGAAGAAG 
    AAGAAATGAC ACAGGCCACG TGTTGTGGGA CCCATTATTT TGCTTTTTGT 
    TAAGCCCTTT CACTTTCAGT CCTTTTCGTT TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100935 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3366-1 - 3-prime edge 
    CTCTTCTCGT ACCGCTACTC CGACAACGCA GCCTCTGACT GCATCGTGTG 
    TCTGTCTAAA CTCAAGACCG GAGAAGAAGT GAGGAAGCTA GATTGCAGAC 
    ACGTCTTCCA TAAGCAGTGT TTGGAAGGCT GGCTTCAACA TCTCAACTTT 
    CAATTGCCCG CTCTGTAGAT CTCCATTGCT ACCTCATCAT CATCAGGGAC 
    ATGGCAGTGA TGCGTCGATC TCAGCCTTCC CTCTTCGCTC TACCTCTACT 
    GCATCATCTC ATTGATTTTT ATGTGAAGAA AGAAGAAAGC AAGAGAGAAG 
    AAGATGGAGG GAGGATGCTT TTTTATTTAT CTTCCTTCTC CTCTTTCCTT 
    TTTAGGAGAA GATTCTTATT TCTTACTACA GAAGATTGAT TCTTCTTATA 
    TATCTATATA TATATAACCT TCTATATTTA GCTATGTTTT TGAGGAATCT 
    CAGATCGGAA GAGAGGTCCT TTTGTTTTTC AGATTTCCAC TCTGTAAATT 
    CTTAGTATGA AAAGAATCAA ATTAAGCT

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR