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Mutant Lines
53-3324-2

53-3324-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 183738 [Map]; Strand: c
- AT4G00420.1 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron1 (5UTR)
- AT4G00420.2 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron1 (5UTR)
- AT4G00420.3 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron1 (5UTR)

CTTGTGTGTG TGATTTGAAT TGTCTTGTGT GGTTAGCAAA ATGCTGTTTA 
ACTACTAAAT ATTTGGGTCT GTCTTGTTGT TTAGGCAAAG AAGATATTTG 
TCTATTGTTG TTTAGGAACT TGAAGTGTTG TTTCTGTAAT CTAATCAAAG 
GGTTTTAGAT AAGGAGAGGA AAGATATATG ATAGTTAAGA TAGTTAAGAT 
AGTTAAGATA ATCAAATTTC GTTTCTTTAC CATAGTTAGA TATTTCCATG 
TTTTCTAGGA CCAATTCGAA TACTTGTGGC CTACTGTTTT GCTCAAGTTA 
GTCATCTTTC ATAGGGCTTT ATTGTAGAAG CTGGGAAATA TTTATGCTTT 
GTGATTGGAA GAAGGATATT TCAGTGTTTA TACTAATTGG ACGATCCTAT 
GTGGTGTCTG AAAGCGGTTG CTGTTTTGCA GGCAAGCAAA AGATGTTGTG 
AAAGGCATTT AAAAAACGGA TTGGTAGCAG GAATCCAAAA GCTCAGCTTC 
TTGCCATAAC TGTGAGCTCC TAGATAACTG TCTCTCCTTT TTATTTTCCT 
TTTTGGTTAC TTCATTGCAA TAGCCACTGT TCTTTCTGTA ACTGTGCATT 
TATATAGCCT GCTTAAACAT GTTTATTTAA GATGGTTAAG CTGGAACTAG 
TATGAGTTTT GACCAAAGGG AAAGCAGATT ATTTAGTTAA GTTTAAAGCT 
ACCAGCCCG

AT4G00420.1

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.2

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 72 Blast hits to 72 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.3

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR