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53-3279-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049680 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 53-3279-1 - 5-prime edge 
    GTTAAACTAC TGTCTCAATC ATCAACTCAA GGCTATAAAG AGTTCAAGGC 
    AGAGGTATTT CCAGTATAAT CTTACCCACG AG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049564 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 53-3279-1 - 3-prime edge 
    AGTTTAACAG CCACCTGTTC AGAACCATTT ACAGTACCAT GGCAGACAAC 
    GCCAAATCCT CCTTCCCCTA CAACTCTTCC GAAATTATTA GTCATTTTCG 
    TAACCTCTGA ATAAGTAAAC TTTCTCTTTT TCATCTACCT CGGACG

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR