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53-3118-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24790553 [Map]; Strand: w
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 53-3118-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATAGGGT CCATGCCAGT AGTCTAGAAT 
    CCATGTATAA ACAACCATCT TAAAATTAAT TGTTTTTATA TATAGACACA 
    TATTTAAAGA AGAATGTAGC AAGTTGACAT GCCGGTTCAT CTAGGAAGAC 
    CAGCTTGGGA TCGCCGATAA GTGCTACCGC AACACTGAGT CGACGTTTCA 
    TTCCACCACT GTAACTTCCT GCTCTAACTT TCGCCGCTCC TGTCAGTTTT 
    ACATCCGCCA GTAACTTCTC AGCAGTCTAT AACAGAAACG AAACTTGTAA 
    GATAAGTTGC ATGGATTGGA AAGTTCAATA AAATCATCAG ACCTCTTTGC 
    ACTTTGAGAT TTTTCAGTCG GCCTACCGAT TTGATCGATG CTGGTGGCAA 
    CCCTTTGATG CTAGCAAAGA GGTGGAGGTG TTGTTCACTA GACAAAGCAT 
    CCCAAAGAAT ATCAAACTAT AAAAAAAGAA AAACGTGTAA GAGATGATTG 
    TATAAGAGAG AATGCTAGAA ACATTTATGA GATTGATACT TACCTGAGGA 
    CACACTCCTA TCATTTTGCG AATGTTAGAT ATACCCACAG AACTTCTTAT 
    GGAGTCTCCA TATATAAGAG CTGTTTAAGT CAATCACATG GATATTATTA 
    GAATGGTTAA AAATGCTTTG AGAACTTTTT GCTTCCTCTC TAAACAGATA 
    CTTACCATCA CCACCAGTAA CTGGATTTAT GCCAGTCAAA CAACTAATAG 
    TAGTTGTTTT CCCCGCGCCA TTAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24790451 [Map]; Strand: w
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 53-3118-1 - 3-prime edge 
    ACAAAGACCA GTACTTGGGA CATTATACAA GAGTCAAAGA AAGGTCGTGC 
    CATCATACTA ACGACGCATT CTATGGAGGA AGCTGATATT TTAAGTGATC 
    GAATAGGGAT CATGGCTAAA GGCAGGCTCC GCTGCATTGG AACCTCAATC 
    AGGTTAAAAT CTCGCTTTGG CACGGGATTT GTTGCTACCG TTAGCTTCAT 
    CGAAAACAAA AATGACAATA ACATCGGTGT TGGAGCTTCG CACGAGCCAT 
    TGAAGAAATT CTTTAAAGAG GTAACATACA CTCAAAAGTA TACTAGCAAA 
    AAAAAAAAAA AAA

AT5G61690.1

Model type
Protein coding
Short Description
ABC2 homolog 15
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 15 (ATH15); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR