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Mutant Lines
53-2946-1

53-2946-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 69586 [Map]; Strand: w
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)
- AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)

ACTCCGAGAA TGCTGGTTTT AAGTGCAGTG CACAGACAAA CGGCAGCTTC 
AAAGTCAGCC AAACCTTTGA TGAGCGAGCA ACACTCCTGG CTCNGTGGTG 
TACCGATGAC CTCACTAACC AGACCTAACC AGCTCCCACA CACTCCAAAT 
TTGAGTGTGT CTCTTGGACA TTTCGTGGTG GCTTGTTTTG CGGGAGGGGG 
AGGGCATGGC TTGACGGTGG CTCCTGGTGT AACATGGCCG AAGAAGAATG 
TTATGTTAAG GAGCAGCAAG ATGAGAAGAG ATCGCAAAGC TTTCGAGATA 
CCCATTAGGT TTATCTTGAA ACTAGTGCTA TGTGATACCT ATGAGGAAGA 
AGAGAGGCCT TAACAATTTG CGTTCTTTCT TTGTTGGTGC CTTTATCATT 
GGGGCTTTGT GGACATAATT GTTTGTGTTA TCCCTAGTTC TGTAAAACGT 
ATTTGTCTT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 69474 [Map]; Strand: w
  - AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
  - AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-2946-1 - 3-prime edge
```
CCTACTCGGA GTTGCTCCTG TCAAAATTCC CGTTGCTCTC ACTCTGCTTC 
TCAACTCTTG CGGCAAAAAT GTTCCTCAGG GATTCGTCTG CTGATATTAT 
TATGTGTGCT CTGTCTCCCT TAATCAAAGA AAGAACGTTC CGAGACTCAG 
AGATAGTGCC TTGTATTATT GTATTCGTTT ATGCAATATT TTCAGAAAAA 
AGAGTTATGT TTTGGTTCAT TTGAATAATA CAGTCCTAAA TCTTTGTCTT 
AAAATCACGT AAC
```

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.2

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR