1. Home
  2. Mutant Lines
  3. 53-2944-1

53-2944-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463454 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2944-1 - 5-prime edge 
    GTTTTGAGTC ACCACAGATG AGCAGTCTGA GCTCTCCCAT AATTCTGATT 
    TATCACTAAA GTCCAGAAGC AATGACCGAG TAATGCTCGG GCTCTTCTCT 
    AACTCCAAGC TTTCTTCTTT CTCATCAAAC ATGTTGCTTT CCACCACCTG 
    CAAGAATAAA AACCAAGTTA ACATCTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463570 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2944-1 - 3-prime edge 
    CTCAAAACCC AGAGGATGAT AACTCGTCGG TGTGGTCGAT GCAGGCCAAT 
    GCAAGTGCCA AAGACGAAGA GTATGATGAT GAAGAGGAAG AAGCCTATTC 
    TTACGGTGAG GAATATGATG AGGAATACTA CGACGAGGAA GAGGAGGAAG 
    AAGAGGGAGG GATTGTGGAT GGGT

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR