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53-2855-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048664 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 53-2855-1 - 5-prime edge 
    CTTACAGCTT TTCTAGTGTC GTAAGATTTT GAATGGCAGC TGCTATCGTT 
    CCAGTTAAAC CACTTGATGA CAAGTTTCTG GTGAAATTTC CAAAACCATA 
    TTCAATAATA TGATCATGAT CACTTTATAG ATCCTGATGT GTATACTAGT 
    GAACTAATGG CTTACAAAGT AGTGATTCTT GGTGGCGTGG TTATATCTGT 
    GATGCTGCAG TTTAAACCAT CCCACATAAA CTGTTGAGGG ACGCATGGAT 
    CGCTTTGCCA GTTGATTCTA CTCAATTCAT AGGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048780 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-2855-1 - 3-prime edge 
    GCTGTAAGTA TGTCTTGTTG CTGATCAAAT GTTACGTGTA TGCAAAAAAA 
    AAATGTTATG TAATATGGTA TTATATTCTC TCTTGTNAAC TTTAGGGACT 
    NGNCAAATAA TANCTTGNCC GGANAGGNGC CANAATTTCT AANCANCATN 
    AAATCGCTGT NGGNCATGTA AGTTTCTCNC AAAANCATAT TTTCCAAAAN 
    GCTTTTCACA TTCCACCTTG GATCATGTNC ATGCNTGTNT CACAATTTCT 
    CTTTTTTTTT NGCAAAACCT NAACNGGNAN CAATTTNANN GGNCCANTNC 
    CNNANTNTTT NNAANGNAAN GGNCTNNACC TCCNGNAAAA ANCTNCCACC 
    CNGGNCNGNA ACCCNCCTTN CCCCTTAAAA AGNCTTCCCC NCCCAATNAA 
    AAAGGNTCCC ACCCNGGNCC NTNAACCNCC CNNGCCCTNA TA

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR