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53-2649-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24795852 [Map]; Strand: c
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 53-2649-1 - 5-prime edge
    CCCAAGAGCC CGGTTCCGTA CACCAGTATG TAAGCAATGA CTACAATATT 
    AATTAAGCCA TAAAACAGAG AAATCCATTC AAATTTCAAC TCTGACATGT
    TCTTGAGCAG TGGAATATAT ATTCAGGAAA TGTGGTATAC CTGTTACAGT
    CTTAACCTTT GAGAATATCG AAGAGAGTAG AAAAGCGAGG GAGATTTGTA
    GATTTGAGTA GATGAAATAG AAAACAAACT GGATGCTGTA GTCATTGCGC
    CGGAAATACT TGAGTCCTAT AGCAGACCCG AAGCCCACCA AAGAAATAAC
    ATACAACATA GATATGGTGA GAAAATAGGC ATAGGAAATC ATCCAATATG
    GACCATCGCC TAGCCCGTGC ATTTTCATTA TAATTCTTAG ACGTTC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24795973 [Map]; Strand: c
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 53-2649-1 - 3-prime edge
    GGGTAGCTTT CTTTTCCAAA AAATGATTGA AACTCAGTCA TTCCCCGGTA 
    ATTAAGTCAA CAACTTGACA AACAAACAAA AATCAAAGAT GCTCATGTTT
    ATTTACTATA CAATGTATGT ACGTTTGCAG AAGAATGGAT TCTTGCCATG
    GAGTTGTATC CCGGCTTTTC TCTATACCGC GGGTTGTATG AGTTCTCGCA
    ATATGCATCC CGAGGAAACG GGATGAAGTG GCAAGATCTC AGTGATAGCG
    GAATGGGTGA AGTTTTCTGT TTCA

AT5G61700.1

Model type
Protein coding
Short Description
ABC2 homolog 16
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 16 (ATH16); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 14 (TAIR:AT5G61740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR