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Mutant Lines
53-2502-1

53-2502-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 4111672 [Map]; Strand: c
- AT3G12915.2 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
  Distance: -957; Region: promoter

ATACCAGTAC ACANAAGGGC GTCAAAAGGT GTTAAGTAAA CNAACTGTTC 
TAAAAGGAAC TGNTCATGTG CCGAACTTCC ANGTTTTAGA AAGTAAACAT 
TGAGACAGAT GCCAGGAAAT TCATACCNTA AAGAGTCTTC GTTTGTTCAA 
TAAACCGTTT CCGCTGCAAT ANAACCAGAA GAAGCATTGT GACCAATTAA 
AGCAAAGAGA CATGGATCTA AATGAGACTC TAACAAAGCT GCAAAAGGAA 
AAAACAAAGG TCATCAGACA CGGAATAGCC AAATGCAGCA GAATAAGAAC 
CCANCTTACA AAGTACAAGA CGGAAATTAC TACACAATCA ATCACACGTA 
CATAGTTGGC TACTGGATAA CCAGTGGAAT CAGTCAGTAA AATGATATCA 
GACTACTCGA TTGCATGATT TGAAGTATAA AGCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 8404613 [Map]; Strand: w
- AT1G23760.1 - [+] show detail - BURP domain-containing protein
  Distance: 312; Region: intergenic
- AT1G23770.1 - [+] show detail - F-box family protein
  Distance: 601; Region: intergenic

CTCACTAGTC ACTAAGCTAC ATGTCTTTAT AGGCTGCATA ACTTGTTGTT 
TCTCCCCAAA AAAAATCTCA CCAAGTTCAG TGAATCTTCA TTAAATAAGC 
TTTTGACTTC CCCATGTTAC ATTGCATCAC TTCTCCTTTA CTTCATTGAG 
AAATTCTTGT ATCAATAACA TTTCCCTGAA TGTTGGAACT GTGTTCAGTA 
AAATCAGTCT TACACTTCCA GACAAAGAAA CATGGTCACC GTAACTTGGA 
TGATATGATC AGTTGGACCG GACTGATTCT CCTAGAACCG GTTTGCTTAA 
ACCCCCACAA CTTAAATTGT CTAGGTGAAT TCAATAATTT TTAGAAAATT 
TACATTCCAC TGCTATTTTT TTTTAACTTC

AT1G23760.1

Model type: Protein coding
Short Description: BURP domain-containing protein
Curator Summary: Encodes aromatic rich glycoprotein JP630.
Computational Description: JP630; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 1783 Blast hits to 1423 proteins in 248 species: Archae - 0; Bacteria - 362; Metazoa - 287; Fungi - 197; Plants - 556; Viruses - 4; Other Eukaryotes - 377 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23770.1

Model type: Protein coding
Short Description: F-box family protein
Computational Description: F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23780.1); Has 268 Blast hits to 268 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12915.2

Model type: Protein coding
Short Description: Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description: Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1).
Link: InterPro Scan - TAIR