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53-2458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13432 [Map]; Strand: w
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -73; Region: promoter
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: -95; Region: promoter
    Flanking Genome Sequence: 53-2458-1 - 5-prime edge 
    AGGCAAAGCC GNTCGCCGTN GCTGGGGNTT TATCGTAGAC ACCTGANGCG 
    CACGTGCAAG CTATTTCCTT GGGCTTGGGC TTAGACTCAT GAGATAAAGC 
    AAATAAAACC CAAATGGGCT TTTTAGAAAA GAAACCCAAA TAACAGAGTA 
    TCTCTTCTTC TCACTCGAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13315 [Map]; Strand: w
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: -212; Region: promoter
    Flanking Genome Sequence: 53-2458-1 - 3-prime edge 
    TTTGCCTTGC TCATTCAACC TCGCTCGTCG TCGTCGTCGT CTCCACTTCG 
    ATTTTTCAAT CAGTAATATT GGTGGTTCAG AGATGATGAT GATGAATCTT 
    TTAAGGAGAT CAGCAGATAG CCATCGGCCG CCAATCAAAA TCGAAACTGG 
    CAGTCGTTTT CCTCCGCTAC ACAACCTTGT TCCGGAATCC CAAAATCGGT 
    AAGGCTTTCG TATTTCATCT CACCTCGAC

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR