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53-2429-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463476 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2429-1 - 5-prime edge 
    CCGACGAGTT ATCATCCTCT GGGTTTTGAG TCACCACAGA TGAGCAGTCT 
    GAGCTCTCCC ATAATTCTGA TTTATCACTA AAGTCCAGAA GCAATGACCG 
    AGTAATGCTC GGGCTCTTCT CTAACTCCAA GCTTTCTTCT TTCTCATCAA 
    ACATGTTGCT TTCCACCACC TGCAAGAATA AAAACCAAGT TAACATCTTC 
    TTATCATTCC CCAAGAATCT TCCATCTATC AGCAAAAAAC ATATACAAAT 
    CTAGTTTTAC CTGAGACGGT GCTCTGAATT GTCCTGCAAC TACCGGAGAA 
    GTGATCACAA CCTGCACTTC GTCTGAGAAA CCAAGAACTT GGGGGGTGTT 
    GGCCGGAGTT GGGGCGAGAA GACCCATGGG AGAAGTAACG AGATGGATGA 
    AAGGACGAGA TTCCAACGAA ATCTTGGTGA GATCTGCTTC TTCCTCAACC 
    TTCTGCAAGA GAGTCTTGAC TTGGCCTCTC AAGAGAGCCT CACCAGATCC 
    AGGAGTGTTA TTGATTCTGC TCATGTTCCT CTTCCCAACA ACTCCTGAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463599 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2429-1 - 3-prime edge 
    GTGTGGTCGA TGCAGGCCAA TGCAAGTGCC AAAGACGAAG AGTATGATGA 
    TGAAGAGGAA GAAGCCTATT CTTACGGTGA GGAATATGAT GAGGAATACT 
    ACGACGAGGA AGAGGAGGAA GAAGAGGGAG GGATTGTGGA TGGGC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR