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53-2384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24047404 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2384-1 - 5-prime edge 
    TACACAGTCC CGAGATCATG CACATCCCAA CATCAAACAA GTTGCAGGTT 
    TGTCTTGTTA AGACTGGGGA AACTACACCG TTAATATCGG TTTTGGAAGT 
    ACGGCCGATG GGAAGTGGTA CNTTATCTCA CCAAGTCTGG CTCTCTGAAA 
    CTTTACTATC GAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24047289 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2384-1 - 3-prime edge 
    GACGTGTACC ATTCACTTGT TTTGCCAAAT CTATCGTGGC CCATGGATTA 
    GGTCCAAGAT ACAGATCAAA CTTGGGGCCA GTGTCACGAC CATCATAATT 
    TCCATATACA AACCGAGCCC TGATAAGATG ATTTCTTCCC TTCTCAACGT 
    TTAGATTGTA GCAGTTCCGT TTTCCGTCTG GAAAATATCT CATCGTCGTT 
    GATGGCTTCA GGAAGTCAGC CTCCAGATTT GCTTGAATCC TACCAATTTT 
    TCCACTCTGG ATGAATGCTG CGTCCGAAGA AAACTGCAAT CCAGTCCTCG 
    GCTCTGTATA AGGAGATGGT TCATTCGCGG GTAGACCACA ATCCAAACTG 
    ATGAACCCTG TTACGAGACA TGGAAAAAAA AACATGAATG TTGAAAATAC 
    GATTAATAAG AACAAGAAG

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR