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53-2351-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23421163 [Map]; Strand: w
      • AT5G57800.1 - [+] show detail - Fatty acid hydroxylase superfamily
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2351-1 - 5-prime edge
    GNTACNAGCC ANTNATCCNC GAGCCNGATC TGNTACATGN CACCACCATN 
    GATGATGANG ATAAACAGTC TNCCTCTGTG GAACACGAAA GGACTNATCG
    CATTAATTGT GCTACATGTG ACTTTCTCAG AGCCTTTATA CTACTTTCTG
    CACAGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23421093 [Map]; Strand: w
      • AT5G57800.1 - [+] show detail - Fatty acid hydroxylase superfamily
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2351-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCNA 
    TGATTATGNN NTTGCCCCNG NANCATATNA AANTGTNACC TTCTGGATAC
    CCNNNACANA GGAAGAACNG ANGACTATAA GGANAATGAT NNANCTNTAG
    TGAATNATNT TGAANTGGGT CAATGAGATT GGAGATTNTA CCAGTGCCAT
    TCGTGATCAA TCTGTNTAAA GTCGATCCCT TTAGGGTTAA TCCTTACAGT
    ACGAGTCACG AAAAGCATGT TGTTGAAAAC GCTCCATAGT TCATGAACAA
    GTGCTTTGAG ACCGCAGATT ATGAGAATAT GAATACACCA AAGAACCTTT
    GAGATATCTT CTTCATAGAC CCACGAGTAC ACTACTTGTG CAGCTAATGG
    AGCGTAGAGA AGATACTTCA CATATAGACA ACANAATCAC AAAACCCATA
    TGAGATTCAG AAGAGAAACC AAATCTTTCA AAACTCNNAC CANAGATTAA
    AGACAAACCT TGAGATTGCC AAAGTTTTCC CAANGCCNAG CTGATAAAAN
    AGCAACCATN CTTTANCTNG GTCTTCTTCT TNTTTNNCTT CTTCTTCTTA
    TTCNCTCCNN NGGGNTATAT NANNTNTCTC CTCNGAGNNN AAANACCGGG
    NCTTTTTNTG ATTNATCCCN CCCTTTTTTT TNNTNTTNNC NGGGNNNAGA
    AANAGGGGNT TTTAAAAAAA AANACNAGCG CC

AT5G57800.1

Model type
Protein coding
Short Description
Fatty acid hydroxylase superfamily
Curator Summary
encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.
Computational Description
ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
Link
InterPro Scan - TAIR