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53-2039-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185172 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -658; Region: promoter
    Flanking Genome Sequence: 53-2039-1 - 5-prime edge 
    TTCGCCGTGG GTCCCACCCG CTATGTAGGG ATACCCCATC TAGTCTTAAC 
    GAGCTTTGAT GCATGAAAAA ATTCGAAAAC AATGCTTGAA CAAGTAATTT 
    TGGGTCCGTA ATATAGCCCA AATCACGAAA ATGCCCGAAA AAGTACTTAA 
    ATGTCAAAAT TTGGGGTCGA CAAAAAGTCA ATGGAAAAGT TCCATTGTCC 
    TGCTTCTTTC GTCGGAGGGC TGTCTCTGNT ACTCCACTAA

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR