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Mutant Lines
52-1269-1

52-1269-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75901 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -512; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -523; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 52-1269-1 - 5-prime edge
```
CTCTACTCAT CCTCCCTCCT CACTGCAGGT TTGAGAACAT CACTCTCTGG 
AGGACAATTA CCGGTAAGGG CCACCGCAGC AATGGGTTAG TTCAAGCAGT 
GATCTTTGAA GCCTCCGATC GTAACAATAT CGGTGGTTCA GCTTACGGAG 
GCCAAAGATC TATTTGCTGC ACTCCAGATC TGGCCAAGCT
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75785 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -396; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -407; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 52-1269-1 - 3-prime edge
```
GAGTAGAGTA GAGTAGAGAG CATCAAAAGA GTTGAAAATG TAATCCATAG 
AATATACCTG ATTAAAGATC GGGAAGAGGC GAAGATGCCC TCGCTGCCAC 
CGTAGAGGAG GAGAGAATTA CCGACATCGT GGAAGGGCTG GGAAGAGTAG 
ATGTGGGCNG GAGGCCCCAG CGATTCTAAA GTGTAATGAT AGAAGAAATG 
GGCACAGCAG CGCAGACAGC TGGATCAGTT TTCCCAAATC CATTATCGGG 
GAACGAGGAT CTCTGAGGCT AACTAACAGG AAGGAAGCGG GAGAAGAGCA 
GCTGCAGAGT CGCTCTTGTT CTAGCTGCTG CTGACTTTGG TGGACCAACC 
AACTTAATAT AATGGTTTGG GCCTTAGAAT GGTTTGGGCC TATACCGAGA 
GGCCCGGCTT ACCCAGAAAG AAATGCAGCA ATAGTCAATG CCACTGCCTG 
GAATT
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR