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52-1192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 298339 [Map]; Strand: w
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: -238; Region: promoter
    Flanking Genome Sequence: 52-1192-1 - 5-prime edge 
    CCAATAAGCA TAGCTACAAG TCTAAATTTA TCTCATTTCG TAAATATAAA 
    TTATAAATTT ATCCCTTCTC TATCATATCC ATTTTTAGTT AATTTATGTT 
    AAATATTGTA GACATATGTT TATCAAATTA TCAATGATCT CATCTCATAA 
    CCTTTATTAC ATCTTTAACA AAAAAAAAAA CCCTTTTTAN NNNNTTNTNC 
    NNTAAAAANN NAATTTNGGT TCCNNAAAAA AAATTTCNNC CCCCGGGNNN 
    GNNTTTNANC CTNAAGGGTN TANNANCCCN GGNAANTNAG NTTAAANGTN 
    NGGGNCTNCC CNTAANAAAC CCCAAANNGN NGNAGNATGG GACNGGNCTA 
    ANGGGCNANT TCCNANNANN NNTTTTTAAA AATCNANNGG GNAAAAANTC 
    NAATNNGNNG GAAAATTNGG GGGGNNACCC NAAANANNAG GGGTGNNATT 
    TAAANAANGG GGGNNANCCC CCCAAATTTT GGGNTTNNAT TAAAAAANCC 
    CTTGGTNTTG GAANGGGGGG NCCATTTTTT NGGGGGNAAN TNACNTAACC 
    AAAANTTTNN GGGCCTTNGG NNCCCTTTAA AACCTNTGGN AACCCTNNAA 
    AAAAAAGNCN NANGGNGGGG GGTTTNNTAA ANNAAAGGGG GNCNGGGGGC 
    CTTTTTNACC TNTTTANNCA AAAGGGTTTN TTTTGGGGCN AANAANCCTT 
    TCCCNGAAAA TTTNCCGGGG GGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 298223 [Map]; Strand: w
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: -122; Region: promoter
    Flanking Genome Sequence: 52-1192-1 - 3-prime edge 
    CTTATTGGTA CTTAAAATTA ACATACATTT TTCTTTTAAA AAACCCCAAC 
    ATTAGCTTTA GCTTCTCGAC CAATGATGAA AATTCCAAGA AAAGAAAGAA 
    ACATTCATAA TTGTTTTTTT TTCAAACAAA AAAAAANAGC GGCCGTTTTN 
    TTATAAAAAG AANATAANCT NTNGGNGGTN GATNCANCNC TTTTNGTCTC 
    ATCTCCTTCT TNTTCTCCTT CTNAAATCTT TTTTTTCAGG CGTACCNAAT 
    CGANTCNTAA NCCCTTNCCC ANAACCAAAA NCTAANCTTN GGATNTTTTA 
    NCCGNCCNTA NANATTCGGG GGTTCTTNTT ANTTTCNACA NATTCTNGAT 
    CCGTTTNAGT NGTTNCNCTC ATNTTNGCTT TTATNCNTNA AACCCTTCTN 
    TTNTNTTCCT TNTTTATCTA AAAANCNTTA GGGTTNTTTG AAATCTTGCT 
    AAAAAAAANG GGNGTNGAAA AAANGGGGNG TTNANCTTNT CGTNCGGGTC 
    GTCAGTTTCA AANATNCANC AAAGGTCGNC GNCAAGTCGT TGGGTACGTT 
    NTTTTTATCA TNTACATACA TATANATCNG ATCTCACATA TTTNACCCAA 
    AAAAGTNGAG TTTNTAAAAN GGTAAATTTT TGGGGAAATT TTGCANATGT 
    GTTCCTTACA GATTCAAGCT TTCTAATGAN GGGAAAANAA GNGATGAAGT 
    AAAANTTCTT GTTTCTNTTC CCAAA

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR