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52-1153-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22237171 [Map]; Strand: w
    Flanking Genome Sequence: 52-1153-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAG ACGCGTGATC ATATAACTAC AAGTCTTTTG TGAATGAATT 
    GATGAGGTTA TTTTCGTGGA CTAGGAGTCT GTTGAACCAA GGATTCACAC 
    AATAGATTTG TTTAGAGAGG GAAAACAAAT CTAGTAATTT CTCTTCATTA 
    GGTATTCTAT CCAAGACTCG ATTACAAAAC ATGTTCTAAT CTCTTATGAA 
    ATATATTAGG GTTTTGCTCA AGAACAGAAA AAGAGTTAGG GTTTTAAAAA 
    GGTATAGCTG CATCCATGAT GGATTGCCTA CGTACCCTGT GAAGGGATCA 
    AGCCATTCGT AGTTCTCAAT AGGTATAAAG TTATGTGTTT CTTCTCCGTA 
    TCCAAAGATC TCCCTTTTGT GAAGTCCCTG AGGCACTTTA TATAGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22817151 [Map]; Strand: c
      • AT3G61660.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 610; Region: intergenic
      • AT3G61670.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: -1438; Region: intergenic
    Flanking Genome Sequence: 52-1153-1 - 3-prime edge 
    TGCGCAGATG GGCTTCTTGG ATAAAAGTCT GTAACGGCCC ATCTCTTTAA 
    CTTTGAACAG AATTAAAGGC TATATTGTTT CCGTTAGAAT TTACCTTTTC 
    TTGTTGAGTA TAGTTTAGCC GTTACAACAT AAAATGCNTT CCTCAATAAA 
    GTATTAAAGC T

AT3G60164.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT3G60966; protein binding / zinc ion binding
Link
InterPro Scan - TAIR

AT3G61660.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46375.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3133)
Computational Description
Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR