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Mutant Lines
52-0960-1

52-0960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 123371 [Map]; Strand: c
- AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATCATAAAGA GAGAGAGTGA AACCAGAGAG GCACCGCCGC AAAGATAGAC 
GACGGCCTGC GTCGGAGATG AGTGAATGGC TTCGACGACG GTACGGATCG 
CAGCGTCTCC CATTGTTTCT CTCGGTTTCG TCTCCTCCCA TTGCCGTGCC 
GGCAAAAAGC CAAATTAAGC CCCCCAAAGT TTCCGTAATT TCAATTTATC 
CCCAACAGTT TCCGTAATAA CAATTCATGC CCAAACGTTT CCATAATTAC 
AATTTATGCC CAATAGTTTC CGTAATTACA ATTTATGCCC AAAATAATTT 
TATATTGCAC TAAAACCCAA GTTGTTTGAT TTACTAGTAT GTAGCCTCGG 
AGTCGTCGCC GTTAGTCCGT GAGGAGAAAA TAGGCCCACT CTGGCACACT 
CTCTCTGGGT TTAGGTTTAG GTTTTTTTGG GGCTCTCTAT CCTAAGAAAC 
TAGGAGACAT CACACTTCAC CAAGTCTACT TATCGACAAT TTTATCGTAT 
CACCATAACG ACAATAAGGG CCGGACTAAT GTTTGTACAC ATGTCCTCTC 
CTTTTACCCT TTTAAGGCTT TAGCTAAATC TAAACCACAT TTATAATCGT 
TTATTATATG AATCTTCTTC TTGCGAAAAA ACATGTCAAG CTACTATTCT 
AAGTAAAATA AGAAAGATGA GCTGTGATTT ATATGGTAAA GTAAGATATA 
AAAGAGGTAG TACTAGTC

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 123458 [Map]; Strand: c
  - AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 52-0960-1 - 3-prime edge
```
TTTATGATTG ATTCGTATAT ACACAAGTAT GTGATTGCTC TGTGCTTTTG 
AGTGATCGAA ATTGAATTCT CTTTCAGGCT TTAGGTTGGT TGATGTCGGT 
TCCTGGAGCG TCGAACACGC TTCTCGA
```

AT2G01220.1

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01220.2

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link: InterPro Scan - TAIR