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52-0914-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2348597 [Map]; Strand: c
      • AT1G07630.1 - [+] show detail - pol-like 5
        Distance: -500; Region: promoter
    Flanking Genome Sequence: 52-0914-1 - 5-prime edge 
    GGTATGAGTG TGTTGANNCT TCTTTGANCG TCCCTGNNTN TNCNCAAATG 
    TAATCTATAC GTTAGTAAAA ACTATCTAAT CCTGTCAGAG AATGGATATT 
    CCAAAATATT GAATTGTGGA ATCTAATTGA TCATCAACGT TGTGAAAACC 
    TTATGATGAG TTNTCNTNTG TNTGACATAT GATGATTACT ATAATCANAT 
    ACTAAACGGA GCTTCTAATG TGAGAACAGG GGCAAAGAAG TTACTAGTGC 
    AAATAATTCA AAAGGAAAAC ATGGTGTCCA ACGACATGAC CGGTCATTTG 
    AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2348708 [Map]; Strand: c
      • AT1G07630.1 - [+] show detail - pol-like 5
        Distance: -389; Region: promoter
    Flanking Genome Sequence: 52-0914-1 - 3-prime edge 
    CACACACGCA TGTCTTCGAC TCCTCTCATA CGGTACTAAC CAGCACAGTC 
    GCGTGCAATT CACGCACTTA GTTGAGAGTG GTCCTTATAG CATCTTTCCC 
    CATTTAAATA GAAACCCCTG AGTTAAAGAC TCTTTTAGTC AACGCCTCTC 
    TCGCGTTCTT ACAACAAATC TATGCGAANC AAANATCATT TACTTGTTTC 
    TGACGTCACA CTTTTCATCT ACTAGTATTT ATTTTCTGTT TGACACCAAT 
    TTTTCTTCTC GCAGATTTAA ATCAGACAAA ACCCGAATAA TATCTCTTAC 
    AGTTTCTTTT CTTTTATTCC TTTCTCTGCN TACTCCACTA GA

AT1G07630.1

Model type
Protein coding
Short Description
pol-like 5
Curator Summary
Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.
Computational Description
pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink).
Link
InterPro Scan - TAIR