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Mutant Lines
52-0910-1

52-0910-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 6687181 [Map]; Strand: c
- AT5G19780.1 - [+] show detail - tubulin alpha-5
  Distance: 0; Region: exon1 (5UTR)

GCCTTCATTT CCTCGATCTC CGTCTTCCTC CTTCTCCGTC TGTCGCAGAG 
CATCGCTCGA ATTAGGGTTT CTGCTGAGAG AAGATGAGGG AAATCATTAG 
CATTCATATC GGACAAGCCG GGATCCAAGT CGGAAATTCC TGCTGGGAGC 
TTTACTGTCT CGAACATGGA ATCCAGCCCG ACGGAATGAT GCCGAGGTAT 
AAACCCTAAT TCTCTCTTTT ATACTCTGTT TCTGTGGATC TNAACGTTTT 
TGAGAGACGA ATGTTTTACT CTGTTACAGT GATACTACAG TTGGTGTTGC 
ACACGATGCG TTCAATACTT TCTTTAGCGA GACTGGTGCA GGGAAGCATG 
TTCCTAGGGC TGTCTTCGTT GACTTGAGCC TACTGT

AT5G19780.1

Model type: Protein coding
Short Description: tubulin alpha-5
Curator Summary: Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.
Computational Description: tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR