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Mutant Lines
52-0870-1

52-0870-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 194090 [Map]; Strand: c
  - AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 52-0870-1 - 5-prime edge
```
TAATATGTTC AACCCAATAG AAGAGAATAA ACCTTCTTCT TACTGTTCAA 
CATTCAAATA AAAAAGAGAT CTTTTTTTCC TCATTTCTGT GNTACTCCNC 
TA
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 59418 [Map]; Strand: c
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -132; Region: promoter

ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
CGGTCACTGA CATGAACATG ATGGTAAACA AAAATACTAA ATGTTATGAT 
ATATTTTTAA ATATTGTATT TGTCTTCTTG AATTACTAGA AACTATTAAA 
AAAAAAAACA TTTTCCCCAT NTTTTTTGAT GTTGNNCCNG TNTNTTTANA 
TGTCATAATN CCTTGCCCAA AAAAAAAAAG GGGNNNNNNA ATNTTTGGGN 
ANGGTTTTNN TTTNTTNNNA NTTNTTTTNN NNNANAAAAC CTTNGGGGNT 
NNNAANNAAN TTTGGGNANT TNGTTTNNTT TNNTTTNNNC NAAAGGGGNN 
NGNNNTTTTT CCNTTTNGGG GNANTTTNNC CCCNAAAATT TNNTTTNGGG 
GTTGGNNNAA CNNCCCNCCC NGGNCCGNAN CCCCCCNNGG CCCTTTAAAA

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00440.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00440.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00440.3

Model type: Protein coding
Short Description: Protein of unknown function (DUF3741)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link: InterPro Scan - TAIR