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52-0734-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 98759 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2104; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1890; Region: intergenic
    Flanking Genome Sequence: 52-0734-1 - 5-prime edge
    CATTTTGGTG TGTGTGTCAA ATTTTGATTT TAAGTTTTTT TTGTTTGTTT 
    GTTAAGTGTA TCAACGAATC TATAGTTCTA GCTTTGATAC CAACTGAAGT
    AACCGGAAGT TTTAATGGAT AAAACTANAN ANNNGGNGAA GANTNGGAAN
    ANAAAAAAAA AAAAANACCN TTGGAAANNG CNNAAAAAAN NTNAAANNNA
    AAANNGGGAN NNNCCCNANA AANNNGGNNA AAAAAAAANA ANNGGGGGAA
    ANCCCCCCCC CCNCNANCNN CAAAAAAAAA AGGGNGAANT TTTTNAANAN
    AANCCNNNCC CCCCCCCCCN GGGNCCAAAG GGGGGGGGAA TAAANGNNNG
    GGNNNNNCCC CCCCCCCCCN AAAAAAAAAA AAATAAAA
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 98875 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2220; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1774; Region: intergenic
    Flanking Genome Sequence: 52-0734-1 - 3-prime edge
    CCAAAATGAG TTACCTTTTA CTCATTCATG TTCATACTAT ATAAAATATA 
    TTTTCGTCGA AACAATCACT CCTCTTAAAA TATTTTAAAT TTTTAATGCA
    AAAAATATTA GTTGTGTTTT GTTTATTTTA TAATAAATGA TTTATCATAT
    AAACAACGAG GATCGATAAG ACACTCGCAT GCTATTTTTA CCAGGATTAC
    ATTAGAATGA GAGTCACAAC CACATAATGA AGACGATCGT CTGCTAGCTA
    TGTGACGAGA GATGGTAAGT GGTTTCAGAT TTTATGATGT AAAGTGGAAG
    GAGTGGTCAA ATAATTAGGT CAAAGAGAGT CGAGGTGGTT GNCACTGGTT
    GGCTATATNG ATGACTAAAC CNCNCACCTN CGCCTTCAAT TTNTATTTTA
    ATNATGNTTT TNTGAAGAAC TAATACTATN TTATATGATC GGTNGNNNCA
    AAA

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR