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52-0323-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22053591 [Map]; Strand: w
      • AT3G59700.1 - [+] show detail - lectin-receptor kinase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0323-1 - 5-prime edge 
    CTACTCCACT ACGGTCNGGA AACNAGCTCT ACTCTNTGAT ACTACACTAA 
    NGTNAGGAAN ATGNNNCGGG ANTTNGGANN GGCNANACTG TNNGAANANG 
    GATTCGANCC TGAAACATCT NANNTAGNGG GANCATTCGG ATATATCGCA 
    CCAGAGTTTC TTTTAANAGG AANAGCAACC ACAAGCACTG ATGTTTACGC 
    CTATGGGTTG GTAATGCTTG AAGTATGTGT GGTANAAGGA TAATTGAGAN 
    ACGTGCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22053507 [Map]; Strand: w
      • AT3G59700.1 - [+] show detail - lectin-receptor kinase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0323-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    TCTTGATGCA GGTGTAGTAG AGCAGTTGCA ACATCTTTGA TGATCCTGAA 
    ACGTTGTTCC CAAGAAAGCC GTTCTTGATT CTCGCTACGG TTTAGATACT 
    TGTCAAGGCT TCCATTAGGC ATATAGTCAT ACACCAAGTA GAGATTCTCT 
    TTATGCCTAC AGTATCCTAA AAGCCTGACT AAATTTGGAT GTCTGAGACG 
    ACCAATGGTC GATATCTCGG CTAGAAACTC GCTCATCCCT TGTCTTGAAT 
    CATGAGAAGT CCGCTTCACA GCGATCTCTG CATCAGAACC CGGAAGTGTT 
    CCTTTATAGA CTTGACCAAA GCCTCCTTTA CCAAGAAGTT GTTTCTCCTT 
    GAAACCCTTT GTGGCATTGA AAAGCTCCTT ATAAGCAAAC CTATGAGGTC 
    CATATTGAAT CTCCCATTCT TCAAGAACCT CTTTAACCTT CTTATGCCTC 
    AAATAGAAGA CGAAACCGAT CCACGAAGCG ACAAACGCAG CAAACACAGA 
    TACCGTTAAG CAGACGGCTA AAACAGTTTT CGTTCTATTA GATGTTTTCT 
    TTGGATATGG AGGAAGGACT GGTATACTAA GCTCCAATCT CGGATACTCG 
    ATTACACCAT TAACAAACCA ACCCATCAAG TAATGAATTG CTCCAACTGA 
    CCCCGTCGAT GCAGTGAATC CAAGATACAT TTTCTCAAGC AAATACNGCG 
    AGAGATCTCG GTTCAAAGAC AAGAGCGGNT TTAGTGGCGG

AT3G59700.1

Model type
Protein coding
Short Description
lectin-receptor kinase
Curator Summary
member of Receptor kinase-like protein family
Computational Description
lectin-receptor kinase (HLECRK); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G59740.1); Has 126414 Blast hits to 124878 proteins in 4927 species: Archae - 148; Bacteria - 14786; Metazoa - 45832; Fungi - 11120; Plants - 35211; Viruses - 459; Other Eukaryotes - 18858 (source: NCBI BLink).
Link
InterPro Scan - TAIR