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52-0161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23315366 [Map]; Strand: c
      • AT3G63095.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -140; Region: promoter
    Flanking Genome Sequence: 52-0161-1 - 5-prime edge 
    CAAAGAGGGC TGCAGAAGGA TTTTAGGTGA TATTGCAGTT ATCCATTTCA 
    TTTGCGTGAC CTTGGTGTTA GGTTGTTTGT AGAGCTTTCT TTCAGGAGAG 
    TGTTTCACAT TGGTATAACA ACAAGTCCTG TTCCAAATTC CACAACCAAT 
    TAAATGACTA AAACTACAAT TAATAGCTGC AACTCCAAAT GCGTGACCAA 
    AGAAATGTGA TTTAAAACTT GGATTGATCA AAAGAAAACA CATGAGAAGA 
    AGATAAAGAT TTAAGCGTTA AGCGTTGATT GATCCTAATC TACAAGATGA 
    TTCCTGCTTT AAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23315482 [Map]; Strand: c
      • AT3G63095.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -24; Region: promoter
    Flanking Genome Sequence: 52-0161-1 - 3-prime edge 
    CCTCTTTGTG CCTTCCTCGA CTTTGAATAT ATAAAGAGAC ACACCTAAGA 
    TATCTCTTCA CACACACACT CTCTCCATGG ATACACTTTT TATTGCAGTA 
    ACTCTGGCTC TCGCTCTCTC CTCTTTCACA AGAGGCCAGA GAGTGATACA 
    GATTCCACCA CCACGTCCAC TATGCGCGTC TCAATACGCC CTAGCTAACT 
    ACGCCTGCTC ACGTCTCCCA ATGCACACTG TCCCACCACC TGCCCCCATT 
    ACCTCACCTC CTGCTCCCAT CGCTCCCCCG CCTCCTGAAC ATGACCACCA 
    CGACCATGAC CACGACCACG ACCACGACGA TGACCACGAT GATGATGACC 
    ATGACCACGA TGATGACCAC GATCACGACC ATGACGATGA TCACGACCAT 
    GACGACGATG ACCGTGACCG TGACCGTGAC CGTGACCGCG ACCGTGACCG 
    TGACCGCGAT CATGACCGTG GTCACGATGA CCATGACCAT AACCATGACC 
    ATGACAATGA TCACAATGAC AACAATCACG ACCATAATCA TGACGCCGAC 
    CACCACAACA ATGACGACAA CAGCCACGAT CAACACCGCC GTCGA

AT3G63095.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary
Encodes a Protease inhibitor/seed storage/LTP family protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink).
Link
InterPro Scan - TAIR