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51-2567-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19641091 [Map]; Strand: w
      • AT2G48000.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -288; Region: promoter
      • AT2G48010.1 - [+] show detail - receptor-like kinase in in flowers 3
        Distance: -286; Region: promoter
    Flanking Genome Sequence: 51-2567-3 - 5-prime edge 
    TGGATNAGTA ATTGTGAGCA GCAGAGCTAT GATAAGACTA AGACACGTTT 
    GGATTTATTA GATAATGCAA TTAGGCTTGT TATTAAATAC GAAACAGAAA 
    CATGAGTAGG TAAGACCTCT TCAGGATCCA ATCAAGAATT TTAAATATTA 
    TCATCTCTCA CCAGATTACC ACTATTGATT GAATAGTATG AAAATGAAAC 
    AAAAAGTGAA AGGAAAGTTC TCGTGCAACT TCGTGGATGA GACTCAATTA 
    GGTTCATGAC ATGTTTTGAC CGTTTCAAGT AAATCAAGTN AATAACACAA 
    TCAATAATAC ACTTAAGAGT ATATATATAT TTAACTAAT

AT2G48000.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G30780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48010.1

Model type
Protein coding
Short Description
receptor-like kinase in in flowers 3
Curator Summary
receptor-like serine/threonine kinase (RKF3)
Computational Description
receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink).
Link
InterPro Scan - TAIR