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51-0833-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11140756 [Map]; Strand: c
      • AT4G20800.1 - [+] show detail - FAD-binding Berberine family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-0833-1 - 3-prime edge 
    TGGGAACATC GACAAGCGTT TTATTGGATA GACCATCGGG TCCCGCAGGA 
    GCATTCTACA AGAGTAAATC GGATTACGTC AAGAAACCGA TCCCAAAGGA 
    AGAAATGGAG AAGATCTGGA AAGCAATGTT GAAGTTCAAC AATATGTGGA 
    TGCAATGGAA CCCTTACGGT GGAGTGATGG ACAATATTCC TGCTGATGCC 
    ACCGCGTTTC CTCATCGAAA AGGAAACTTG TTCAAGATTC AGTACTTTGC 
    GTTATGGACA GACGCAAACG CCACAGACGC TAATCTTGGT CTAATGAGAG 
    ATATATACCA TGAGATGGAG CCGTACGTGT CAAGTAACCC TAGAGAAGCG 
    TTCTTGAATT ACAGAGATAT CGATGTCGGA AGCA

AT4G20800.1

Model type
Protein coding
Short Description
FAD-binding Berberine family protein
Computational Description
FAD-binding Berberine family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26420.1); Has 4385 Blast hits to 4167 proteins in 621 species: Archae - 36; Bacteria - 1918; Metazoa - 13; Fungi - 1639; Plants - 666; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
Link
InterPro Scan - TAIR