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16-3060-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11126488 [Map]; Strand: w
      • AT4G20740.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-3060-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACCGT 
    GAACTGAGGG ACCCCAATGG TTACGGTTCT TACGGAATGC GTCGAGGACG 
    AATCTCGCGA TTGGAGATAG ACGCTCGGAG GCGGCGGAGA TCACCGTGGA 
    ATGTGACGGC GGAGAAGGAG GAGGGAGATG GGTTTCTGGA TC

AT4G20740.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink).
Link
InterPro Scan - TAIR