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16-2145-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Branching::others)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2870227 [Map]; Strand: c
      • AT3G09340.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G09350.1 - [+] show detail - Fes1A
        Distance: -818; Region: promoter
      • AT3G09350.2 - [+] show detail - Fes1A
        Distance: -818; Region: promoter
      • AT3G09350.3 - [+] show detail - Fes1A
        Distance: -818; Region: promoter
    Flanking Genome Sequence: 16-2145-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACAA GGGAGAAGTA CTGAGACATC ATTCAGTAGC 
    TCCATCGCTT CCTTATACAA GAGACGTCCA ACCTCTATTG CAAATTCGTT 
    TGTGTCTTCC ACAAGCAAAC AACCGCTGCT CTCTGAGAAA GACGATGTAT 
    CATTCCTTTC ATCTCAGGTC GGGTTATCCA ACACCGATCT CTCGTATGGA 
    GAACCAAATT TTTGCTCGTT TCCCCAATCT GTTCTAAATG GTAAGACGTA 
    GTAGTATCGA TATTGATTTT GTCTCAAAAG TCTTTAGGGT TTGGGCATTC 
    GGTTCGGTTG AACAGAGATT TTATCGTCAT AACAAAAAGA AAAGTTTCAA 
    TCTCTCTTTA AGTTGAACCT ATTTTTGGTG AAGGAATCAA TGTCCTTTGT 
    GGAATAAGTC TACTCACAAT GCCTTACGCG GTGAAAGAAG GAGGATGGCT 
    CGGGCTTTGT ATACTCTTAT CCTTTGCTAT CATCACTTGC TACACTGGTA 
    TCCTCCTCAA ACGATGTCTT GAGAGCTCTT CTGATCTCCG TACCTACCCG 
    GACATTGGTC AAGCTGCCTT TGGATTTACA GGCCGCCTCA TCATCTCCGT 
    GAGTTATATG GAAATGATTT ACATATATAC TTCACATATC TCCAAACTAA 
    TATTTAGGGT TCTTGATNTC TGCTGAAAGT TGCAGATACT TCTGTACATG 
    GAGTTATACG TATGTNGGGG GGAGTATATA ATCATGATGA GCGATAATTT 
    ATCG

AT3G09340.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G09330.1); Has 5037 Blast hits to 4989 proteins in 303 species: Archae - 8; Bacteria - 84; Metazoa - 1819; Fungi - 980; Plants - 1422; Viruses - 9; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.1

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 622 Blast hits to 617 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 158; Plants - 182; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.2

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.3

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR